DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and vamp4

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_957029.3 Gene:vamp4 / 393708 ZFINID:ZDB-GENE-040625-92 Length:140 Species:Danio rerio


Alignment Length:82 Identity:30/82 - (36%)
Similarity:59/82 - (71%) Gaps:0/82 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 DTISRVHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIR 188
            |.|.:|..|:||:.|:|.:||..:.:|||:|:.|.:|:|:||:|:.||...::.|.|:|:|::.:
Zfish    51 DKIRQVQSQVDEVIDVMQENISKVIERGERLDELQDKSESLSDNASAFSSRAKQLHRRMWWRDTK 115

  Fly   189 VYVVVGLVITFIVYVIV 205
            :.::|.||:..::.:|:
Zfish   116 MKMIVALVVVILLLIII 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428
R-SNARE_VAMP7 124..188 CDD:277224 26/63 (41%)
vamp4NP_957029.3 R-SNARE_VAMP4 50..116 CDD:277222 26/64 (41%)
Blue background indicates that the domain is not in the aligned region.

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