DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and sybl1

DIOPT Version :9

Sequence 1:NP_001286255.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_005157192.1 Gene:sybl1 / 393236 ZFINID:ZDB-GENE-040426-1055 Length:220 Species:Danio rerio


Alignment Length:217 Identity:114/217 - (52%)
Similarity:160/217 - (73%) Gaps:0/217 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPILYSVISRGTTVLAKFAECVGNFAEVTEHIIGRIGVHNHKMTYTHGDYLIHYTCENKLVYMCI 65
            |.||::|::||:|||||.|...|||.||||.|:.:|...|:|:||:||.||.||.|..::||:||
Zfish     1 MAILFAVVARGSTVLAKHACFSGNFLEVTEQILAKIPSENNKLTYSHGSYLFHYICHERIVYLCI 65

  Fly    66 TDNEFERSRAFLFLADIKQKFIQTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDTISRVH 130
            ||:||||||||.||.::|::|..|||.:..||:.|:||:|||..||.||.:.|..:..|.::...
Zfish    66 TDDEFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSTLAAQMKHHSDPKGSDRLTETQ 130

  Fly   131 GQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVYVVVGL 195
            .|:|:||.|||:|||.:..|||:||||::|||||.::||.|:..|||||..|..||:::.|:|.:
Zfish   131 MQVDDLKGIMVRNIDLVAQRGERLELLIDKTENLMDSSVTFKTTSRNLAHAMCMKNLKLTVIVVI 195

  Fly   196 VITFIVYVIVSMACGGLAWQSC 217
            |:..::|.|||.|||||:|.:|
Zfish   196 VVLVVLYFIVSGACGGLSWPNC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_001286255.1 Longin 32..97 CDD:290490 34/64 (53%)
Synaptobrevin 122..210 CDD:279324 42/87 (48%)
R-SNARE_VAMP7 124..188 CDD:277224 34/63 (54%)
sybl1XP_005157192.1 SNC1 1..172 CDD:227472 91/170 (54%)
Longin 29..98 CDD:290490 37/68 (54%)
Synaptobrevin 122..210 CDD:279324 42/87 (48%)
R-SNARE_VAMP7 124..188 CDD:277224 34/63 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592528
Domainoid 1 1.000 99 1.000 Domainoid score I7046
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4121
Inparanoid 1 1.050 240 1.000 Inparanoid score I3318
OMA 1 1.010 - - QHG53513
OrthoDB 1 1.010 - - D1211929at2759
OrthoFinder 1 1.000 - - FOG0004661
OrthoInspector 1 1.000 - - oto40938
orthoMCL 1 0.900 - - OOG6_101193
Panther 1 1.100 - - LDO PTHR21136
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5105
SonicParanoid 1 1.000 - - X3273
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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