DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and snb-7

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001023622.1 Gene:snb-7 / 3565852 WormBaseID:WBGene00014084 Length:102 Species:Caenorhabditis elegans


Alignment Length:85 Identity:23/85 - (27%)
Similarity:43/85 - (50%) Gaps:10/85 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ISRVHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWK--NIR 188
            |.|...::|.:|.||.:|:..:.:|..||:.||.:.:.|...|..:.|.:..:.|:|.||  ::|
 Worm    18 IMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREMSWKANSLR 82

  Fly   189 VYVV--------VGLVITFI 200
            ..::        .||..:|:
 Worm    83 YGIIAVSSVSAFAGLAYSFL 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428
R-SNARE_VAMP7 124..188 CDD:277224 19/63 (30%)
snb-7NP_001023622.1 Synaptobrevin 14..88 CDD:395764 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.

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