DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and vamp2

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_956299.1 Gene:vamp2 / 336281 ZFINID:ZDB-GENE-030131-8225 Length:110 Species:Danio rerio


Alignment Length:80 Identity:20/80 - (25%)
Similarity:47/80 - (58%) Gaps:0/80 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ISRVHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVY 190
            :.:...|:||:.|||..|:|.:.:|.:||..|.::.:.|...:..|..::..|..:.:|||.::.
Zfish    26 LQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKNKYWWKNAKMM 90

  Fly   191 VVVGLVITFIVYVIV 205
            :::|::...::.:|:
Zfish    91 IILGVICVIVLIIII 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428
R-SNARE_VAMP7 124..188 CDD:277224 18/61 (30%)
vamp2NP_956299.1 R-SNARE_VAMP2 24..86 CDD:277223 16/59 (27%)
Blue background indicates that the domain is not in the aligned region.

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