DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and Sec22

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster


Alignment Length:201 Identity:52/201 - (25%)
Similarity:100/201 - (49%) Gaps:23/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ISRGTTVLAKFAECVGNFAEVTEHIIGRIGVHN-HKMTYTHGDYLIHYTCENKLVYMCITDNEFE 71
            :..|.::|        ::....:.:..::|.|: .:.:...|.||.||..||.:.|:.:.|..:.
  Fly    26 VPSGRSIL--------DYQNQAKMLFRKLGTHSPARCSIETGPYLFHYLIENDVCYLVMVDKMYS 82

  Fly    72 RSRAFLFLADIKQKFIQTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDT-----ISRVHG 131
            :..||.:|.|:.|:|...||.:|.:........||.       ||..::::..|     ||.::.
  Fly    83 KRLAFNYLEDLAQEFHANYGRRVNSVTRPYAFIEFD-------VYIQKAKKQ
LTDRRRNISNINT 140

  Fly   132 QIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVYVVVGLV 196
            |:.:::.|||:|||.:..||..|..|..||:|||..|..::|.::.|.|:..:  ::...:..::
  Fly   141 QLQDVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSMY--VKAMALGMIL 203

  Fly   197 ITFIVY 202
            :.||:|
  Fly   204 LVFIMY 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428 25/109 (23%)
R-SNARE_VAMP7 124..188 CDD:277224 23/68 (34%)
Sec22NP_001259103.1 Longin 3..127 CDD:341428 26/115 (23%)
R-SNARE_SEC22 132..195 CDD:277219 22/64 (34%)

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