DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marc and ABA3

DIOPT Version :10

Sequence 1:NP_610523.2 Gene:Marc / 36014 FlyBaseID:FBgn0033451 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001322902.1 Gene:ABA3 / 838224 AraportID:AT1G16540 Length:842 Species:Arabidopsis thaliana


Alignment Length:1092 Identity:199/1092 - (18%)
Similarity:346/1092 - (31%) Gaps:377/1092 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 PKEVVKALKDKQVKRQEHIYEF-----IMTEKHHVQTLLVMQKVFVESLQKHFSHLNLERMFPRL 474
            ||:  |..::|:.||...|..|     .|.:....|.|...||:|...  .|...|.:      :
plant    31 PKK--KNPREKESKRILRIVSFTMDSSFMEDDEGAQLLEDAQKLFDNG--DHIKALEI------I 85

  Fly   475 VELTELHTGFLRKLRLKQREHHVVDSIA------DILLDFF-SSMSAQKLKSAYGEFCSNHRSAL 532
            .:|..:|...:...||..||..:.|.:|      |:...:| :|.............|::....|
plant    86 EDLILVHGEDITAWRLHIREGKMFDDLAKKTEDPDVKFAYFLASAECFSEDGTLSPICASSLFLL 150

  Fly   533 DTFKCYMTGDNVFAEWYKHCQQNPLLKKKGIPECILFVTQRLTKYPLLIDPLLKSSREDKIEQEK 597
            .    .|.|..::   ||..     |||              .|..|.::.|  .|:.|.:.|..
plant   151 G----QMLGSVLY---YKKS-----LKK--------------AKQGLSVNSL--PSKSDSVAQLS 187

  Fly   598 LQKAMSLVKE------ILVDVDARVA-------------------DKEKEDRQLEIFK------- 630
            ||....|.|:      ::.|.::.:|                   .|:.:|.:.:.||       
plant   188 LQAQRELDKKNKALLSLINDAESEIASSKTLVGSTVKNTKPKVVESKKSQDPREDAFKGLRSYWV 252

  Fly   631 RIDAKSCATFKKDKFKKSDIISCNRKLRF-EGVATLMQGRSKMQTVLVVVLSD--CLFFL----- 687
            .:|.|    .|:|..|    :|..:...| |||....:.|..::.||.....|  ..|::     
plant   253 GLDVK----IKRDFMK----VSIAKLTSFVEGVGHYKEEREVLEKVLTSAKEDREWKFWICRTLC 309

  Fly   688 -------------LENSHKYSFFTPENKAGVVS------LQKLLIREKAGTESRGIYIISSNPAY 733
                         ||..|. :.|.|.::..:|.      ::|:::......::    :.::....
plant   310 SRKFSSAEECKNHLEQQHA-ADFKPSSEKDIVKRIGKDWVRKIIVGSWEPVDA----VAATEMIK 369

  Fly   734 PEMYELKVQNPKDKNVWIQSIRAAVIDCPSDESEAE-----------------------DYM--- 772
            .::.::|....|.||.|.:....||     ||..::                       |:|   
plant   370 NQLADVKAFASKAKNGWSKEWPLAV-----DEERSKLLKEIKLLLVSFCDLKILSCSIRDWMMCF 429

  Fly   773 ------SME-QRQKIIDLKQANMREIICKMRQKDFEQAI-------------------------- 804
                  .:| ..|.::|.:.......||.:..::..|.:                          
plant   430 PAKHLGKLEVSEQSLVDSRLVETPHSICFLESQELTQILEFLNHIKCKRNDGTDLVCRAVDSVLG 494

  Fly   805 --LLEEKIAL--QLSLLL--------------DNEQNAEQLGPAVE------------SFISNYG 839
              .::|||..  |.|.||              |:|.......|:|.            |::::|.
plant   495 RTRVKEKIDFDPQFSFLLLDKRLLKINDDQFDDDEGTINVFDPSVHYAKTPVHGDDIISWLTDYN 559

  Fly   840 SY-----RDLISDDCDTIEIWKRVLNSIQEI-----SSLASSL----YTAA-------------- 876
            |.     |.:...:.|   ||..||.:::..     :..|..|    |.||              
plant   560 SVDKTFPRPIREHNLD---IWLAVLKAVKFTCRTLGNKYAKKLQVVDYDAALTDVENMCVRENER 621

  Fly   877 -TGLP---LSRSSS---SVGERQ-------SELFI-----------SPTLP--KRAETFGGFDER 914
             ..||   .||.:|   .|.|.:       ::||:           .|||.  ...:......|.
plant   622 RRNLPEDQWSRYASLLCDVCEERVPENSLTTKLFVCAVRDVFEGALHPTLDFLDLEDCLNFIREH 686

  Fly   915 RS-------------KQLITAAGTGGGNLTMHSKREQQTNAHSSSSPLDNYAALHVSHHLHTLLC 966
            :|             |.::|..     .|.|.:|.....|  |..|.|:|...|....:...:|.
plant   687 KSLSDDKVLQAIDLLKSVVTQK-----VLLMDTKILLIDN--SRMSLLNNLTRLSAFDNRTYILQ 744

  Fly   967 IISQQMTTIQSLQHQLNNYRENPKTLYRHNDQLEELRNLQDKLQEEKTAWQKQKEQEERELEETK 1031
            ::.      ..|.:::.|.....|:.....|.|.||.  ::|||.::....|:|.|.::..:.:|
plant   745 LLK------PFLLNEIVNMESKAKSDAAEADLLNELE--KEKLQSKEKPQSKEKPQSKKRRDRSK 801

  Fly  1032 KSQKAQQEQIRAEQEDIRQQREQLYRKMEILSS------QGLLLSPSVALPIPTGVVTSLDEALS 1090
            |....   .|.:..:...:.:..:..|.|..||      :| .:.|..||...||.: .:.....
plant   802 KKPST---SISSSLDKTVEHKPSVNLKPESTSSSLRTIEEG-SMEPEDALASETGQL-KISSKTE 861

  Fly  1091 VSEEHHVDSAFAGSIPA--------SSMIGSSVTIDRKKDKWRTASITKTPPANLVSATNAAKIN 1147
            :..|...|.....::|.        .|:.|.:.|      ::.:|          ...|..|.:|
plant   862 IQVEATKDDPDMRNMPGEDSLSEHLESVAGEATT------RYNSA----------FDMTLKALLN 910

  Fly  1148 ATNIK-------------QQLPLKLSSLSST-------KAGSTACNM-----------VMSPNSG 1181
            ...:|             :|:|:.|.:|.:.       ..|..:|.:           .||.::.
plant   911 IKVLKEDLLNQPFQDHQEEQVPIALQNLFTAVVSEAIQDEGVYSCLLRDLLTSQEEVISMSSDAA 975

  Fly  1182 NVAAAA---------HGTNSGVTQMFPLKLADKKVCVAFISSTGTPNHSRTG 1224
            ||..|.         ....|.||::|......:..|:.....|..|..|..|
plant   976 NVVVAILDFWRCWKNPERESLVTRLFTSAENKRMSCIKCRRITNYPQQSCYG 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MarcNP_610523.2 YcbX 50..339 CDD:442450
ABA3NP_001322902.1 PLN02724 1..842 CDD:215384 163/888 (18%)
Blue background indicates that the domain is not in the aligned region.

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