DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marc and Marc

DIOPT Version :10

Sequence 1:NP_610523.2 Gene:Marc / 36014 FlyBaseID:FBgn0033451 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_311228.5 Gene:Marc / 1272285 VectorBaseID:AGAMI1_014992 Length:326 Species:Anopheles gambiae


Alignment Length:323 Identity:127/323 - (39%)
Similarity:185/323 - (57%) Gaps:21/323 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAAVGVGLVAVGGASFLLYRHLTRDVVPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVL 81
            |.|.|:|.||:..|...|.:....:..|::||:.|.:..::.:|||||||:.:.    :.||..|
Mosquito    20 LVAAGIGSVALLSAGGYLVKRRIDNTPPKQWRKAGELTELYVYPVKSCAPIVLQ----QADCADL 80

  Fly    82 SMSFEGIRDRTLMVVNEKNEMITARVYPLMTQIKSKKVSPSKLVF-SAQDMPDLELDFEKLDGPG 145
            ......:||||.||.|...:.:|||:.|.|..::.:.....:.:: :|..||:|.::...| |..
Mosquito    81 GPQRNLLRDRTFMVTNADGKFVTARMKPKMVLVQPRFDERFETMYLTAPGMPELRIEVGAL-GAA 144

  Fly   146 KDVKTSVWGVSIDVMPCGDRINTWFSQAILKKESGLKLVHYPYPKPVRCTNPRLKSMPFIRQEDS 210
            ...:::|||.::..:.||.....|||:.:|.||.|.:|.:|    |::.|:.|...      .|:
Mosquito   145 DATRSTVWGETVPTVDCGSEAARWFSRYLLDKEDGYRLRYY----PLKYTSRRRHG------GDT 199

  Fly   211 GTFNDATSFMLMNLSSVADLNTRLKNPVDALQFRGNFELKMDVDEPYAEDNWQWVRIGEDAVFRT 275
            |:..|.||:||.|.:||.|||.||:|.|..||||.||.::  ..|||.||.|:||||| |||||.
Mosquito   200 GSLQDETSYMLFNEASVTDLNRRLENKVTVLQFRPNFVVR--GPEPYGEDRWRWVRIG-DAVFRY 261

  Fly   276 VAPCTRCIFTNINAKTAERSSEGEPLKTLRSYR-LFNY-SSPALGVHMGLRLPGKVKANDVVY 336
            ..||.|||||.|:..:.....:.|||:||:.|| |.:| .|||.|:|:|||..|:||..|.||
Mosquito   262 EMPCLRCIFTTIDPASGVAHPDKEPLRTLKQYRQLPSYGESPAFGIHLGLRRAGEVKLGDPVY 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MarcNP_610523.2 YcbX 50..339 CDD:442450 116/290 (40%)
MarcXP_311228.5 YcbX 54..323 CDD:442450 106/271 (39%)

Return to query results.
Submit another query.