DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marc and mtarc1

DIOPT Version :10

Sequence 1:NP_610523.2 Gene:Marc / 36014 FlyBaseID:FBgn0033451 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001265365.2 Gene:mtarc1 / 100487963 XenbaseID:XB-GENE-5823411 Length:345 Species:Xenopus tropicalis


Alignment Length:329 Identity:97/329 - (29%)
Similarity:157/329 - (47%) Gaps:28/329 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAAVGVGLVAVGGASFLLYRHLTRDVVPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVL 81
            |.|.|:||.||  ||::.:|  .|....::..:||||.::..:|||||..:    |..|.:|..|
 Frog    28 LCAAGLGLTAV--ASWIWWR--KRQGEEEELEQVGTVSQLLIYPVKSCRAV----PVQEAECSTL 84

  Fly    82 SMSFEGIRDRTLMVVNEKNEMITARVYPLMTQIKSKKVSPSKLVFSAQDMPDLELDFEKLDGPGK 146
            .:....:.||..:||.|:..|:|.|..|.|..| |.......|..:|.:|.::.:.. .|....:
 Frog    85 GLKSGDLEDRHWLVVTEEGNMVTGRQEPRMVLI-SATFHGHSLCLNAPEMQEILIQL-PLPKTNR 147

  Fly   147 DVKTSVWGVSIDVMPCGDRINTWFSQAILKKESGLKLVHYPYPKPVRCTNPR--LKSMPFIRQED 209
            .:...|:|..|.....|::::.|.: ...:.....:|||:    ......||  .|.....|.:|
 Frog   148 VLDCRVFGHDIQGRDSGEQVSEWLT-TYFQSSQPYRLVHF----EAGVMRPRKSKKVEKLFRDKD 207

  Fly   210 SGTFNDATSFMLMNLSSVADLNTRLKNPVDALQFRGNFELKMDVDEPYAEDNWQWVRIGEDAVFR 274
            ...:.||:..||::.:|:..||.||:.||....||..  :.....|.:|||:|..||:|...:.|
 Frog   208 VIAYPDASPIMLLSETSLEALNGRLEQPVSLANFRPC--IVASGCEAFAEDSWDNVRLGTTRLKR 270

  Fly   275 TVAPCTRCIFTNINAKTAERSSEGEPLKTLRSYRLFNYS-------SPALGVHMGLRLPGKVKAN 332
            .:| |.||:.|.:|.::...:.: |||.|||::|..:.|       ||..|.:.|:...|.::..
 Frog   271 VMA-CGRCVLTTVNPESGVITRK-EPLDTLRTFRQSDPSLKHLYKNSPLFGQYYGVEQTGLIRVG 333

  Fly   333 DVVY 336
            |.||
 Frog   334 DPVY 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MarcNP_610523.2 YcbX 50..339 CDD:442450 86/296 (29%)
mtarc1NP_001265365.2 YcbX 57..336 CDD:442450 84/293 (29%)

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