Protein Alignment Lsm11 and Lsm11

DIOPT Version :10

• Sequence 1: NP_610522.1
• Gene: Lsm11 / 36013
• FlyBaseID: FBgn0033450
• Length: 256
• Species: Drosophila melanogaster
• Sequence 2: NP_001166855.1
• Gene: Lsm11 / 501688
• RGDID: 1565523
• Length: 360
• Species: Rattus norvegicus
• Alignment Length: 380
• Identity: 98/380 - (25%)
• Similarity: 125/380 - (32%)
• Gaps: 150/380 - (39%)

  Fly     1 MESRDRKTSNEDDSSEIS----ELDVGSDRFNPLRALYEPNFRVTDAVPKVIY------QNLAAF 55
            ||.|:....:....|..|    .|||.|..|:||.|||.|.      :|.:.|      .|:|.:
  Rat     1 MEEREWGARSARAGSPASPPSPRLDVSSYSFDPLLALYAPR------LPPIPYPNAPCFNNVAEY 59

  Fly    56 ESALK--KFGIWQLNKRQKPGSAEGGDQGTSKKASTSEAVDILPPERRFEPHQMP---------- 108
            ||.||  :.|..:.....:|.|| |...|||..|.||...     .||..|...|
  Rat    60 ESFLKGGRTGRGRARGTGEPASA-GTSTGTSTGAGTSSRA-----RRRAAPTPDPERIQRLRRLM 118

  Fly   109 --------TTSSR-------KKHHRNIFTYMEAAVG-PLELLTKCISPASHNESNERRRVRVVIR 157
                    |..||       ||..||:.|.|....| ||..|.:||        .|..:|.|.||
  Rat   119 VVKEDTDGTAGSRRQGPGRSKKAPRNVLTRMPLHEGSPLGELHRCI--------REGVKVNVHIR 175

  Fly   158 KHGSVGGSVEGELLAFDKQWNLLLRNVTETWKRRKYNYGEQNICDTPVDCT---GRLK------- 212
            ....:.|...|.|:||||.||:.|.:|.||:  ||...|:....|:.:..|   .|||
  Rat   176 TFKGLRGVCTGFLVAFDKFWNMALTDVDETY--RKPVLGKAYERDSSLTLTRLFDRLKLQDSKKE 238

  Fly   213 ----------------------------------------------------------------- 212
                                                                             
  Rat   239 ADSKSAVEDSTLSRYSQTSTWKVASVWGRGDTDRGSHRRSRSVPSSLQASAREESRSELSGRTTR 303

  Fly   213 ----ELGITLPR--TVVKNLNRKNVE---------IRRELPQILIRGENVVLVSL 252
                .:|.|..|  |:.:..:||...         ..|.:.||.||||||:||.|
  Rat   304 TEGSSVGGTFSRATTLSRGQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHL 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm11	NP_610522.1	LSm11_M	<158..204	CDD:212485	17/45 (38%)
Lsm11	NP_001166855.1	LSm11_M	160..225	CDD:212485	25/145 (17%)