Protein Alignment Lsm11 and Lsm11

DIOPT Version :9

• Sequence 1: NP_610522.1
• Gene: Lsm11 / 36013
• FlyBaseID: FBgn0033450
• Length: 256
• Species: Drosophila melanogaster
• Sequence 2: NP_001166855.1
• Gene: Lsm11 / 501688
• RGDID: 1565523
• Length: 360
• Species: Rattus norvegicus
• Alignment Length: 380
• Identity: 98/380 - (25%)
• Similarity: 125/380 - (32%)
• Gaps: 150/380 - (39%)

  Fly     1 MESRDRKTSNEDDSSEIS----ELDVGSDRFNPLRALYEPNFRVTDAVPKVIY------QNLAAF 55
            ||.|:....:....|..|    .|||.|..|:||.|||.|.      :|.:.|      .|:|.:
  Rat     1 MEEREWGARSARAGSPASPPSPRLDVSSYSFDPLLALYAPR------LPPIPYPNAPCFNNVAEY 59

  Fly    56 ESALK--KFGIWQLNKRQKPGSAEGGDQGTSKKASTSEAVDILPPERRFEPHQMP---------- 108
            ||.||  :.|..:.....:|.|| |...|||..|.||...     .||..|...|
  Rat    60 ESFLKGGRTGRGRARGTGEPASA-GTSTGTSTGAGTSSRA-----RRRAAPTPDPERIQRLRRLM 118

  Fly   109 --------TTSSR-------KKHHRNIFTYMEAAVG-PLELLTKCISPASHNESNERRRVRVVIR 157
                    |..||       ||..||:.|.|....| ||..|.:||        .|..:|.|.||
  Rat   119 VVKEDTDGTAGSRRQGPGRSKKAPRNVLTRMPLHEGSPLGELHRCI--------REGVKVNVHIR 175

  Fly   158 KHGSVGGSVEGELLAFDKQWNLLLRNVTETWKRRKYNYGEQNICDTPVDCT---GRLK------- 212
            ....:.|...|.|:||||.||:.|.:|.||:  ||...|:....|:.:..|   .|||
  Rat   176 TFKGLRGVCTGFLVAFDKFWNMALTDVDETY--RKPVLGKAYERDSSLTLTRLFDRLKLQDSKKE 238

  Fly   213 ----------------------------------------------------------------- 212
                                                                             
  Rat   239 ADSKSAVEDSTLSRYSQTSTWKVASVWGRGDTDRGSHRRSRSVPSSLQASAREESRSELSGRTTR 303

  Fly   213 ----ELGITLPR--TVVKNLNRKNVE---------IRRELPQILIRGENVVLVSL 252
                .:|.|..|  |:.:..:||...         ..|.:.||.||||||:||.|
  Rat   304 TEGSSVGGTFSRATTLSRGQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHL 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm11	NP_610522.1	LSm11_M	<158..204	CDD:212485	17/45 (38%)
		Sm_like	<166..252	CDD:294186	37/175 (21%)
Lsm11	NP_001166855.1	LSm11_M	160..225	CDD:212485	25/145 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166351321
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_2CMUN
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	61	1.000	Inparanoid score	I5295
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1605022at2759
OrthoFinder	1	1.000	-	-		FOG0008244
OrthoInspector	1	1.000	-	-		oto96133
orthoMCL	1	0.900	-	-		OOG6_107358
Panther	1	1.100	-	-	LDO	PTHR21415
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	12	11.760