DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1663 and Rsl1

DIOPT Version :9

Sequence 1:NP_610521.1 Gene:CG1663 / 36012 FlyBaseID:FBgn0033449 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_006232164.1 Gene:Rsl1 / 685925 RGDID:1587849 Length:540 Species:Rattus norvegicus


Alignment Length:311 Identity:81/311 - (26%)
Similarity:131/311 - (42%) Gaps:52/311 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EVEPNFSPEKEQGHDELASNSHHD-YISNQPHKAFYSLQRTSPGVIQYFIQQLRRHKFFWITEHG 122
            :|..:||||:.:.......:.:.| .:.|..:..|..|..:.|.::. |::|             
  Rat     9 DVAIDFSPEEWEWLKPAQWSLYRDVMLENYSNLVFLGLAVSKPQLVT-FLEQ------------- 59

  Fly   123 INKKDRMDSSQKVAEALFHRFHFQLDPKVVNASARFLQVWFERQYVMQLSSSDFRCRYPKYYHSL 187
              :.:.||..::.| |..|......||...:.:.....:..:|:   :|...:      |.|.  
  Rat    60 --RPEPMDVKRQEA-ATVHSGIALNDPNCYSKTTNCKSLLIKRR---RLHKGE------KPYK-- 110

  Fly   188 LKFMPTNHISVTICEECDRRFLNERLLRLHKFRVHGGPNPNVCHVCHQSFPLASKLEQHQARYHF 252
                         ||||.:...:.:.|.:|: |:|.|..|..|..||::|...|.|..|. :.|.
  Rat   111 -------------CEECGKALGSLKTLSIHQ-RLHTGDKPYKCKECHKAFSTRSALFIHM-KNHT 160

  Fly   253 KRPEWQCSRCD--YNAPSKWDFQQHQAMHAGQRNYICELCGHSSKTSSALAVHRRTHDQPKLC-C 314
            .....:|..|.  :..||.  .:|||.:|:|::.|.||.||.|....|.|..|:|.|...||. |
  Rat   161 DEKTHKCEECGRLFYYPSM--LKQHQRIHSGEKLYKCEECGKSFCYLSMLKQHQRIHSGEKLYKC 223

  Fly   315 PHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLHKLVH 365
            ..|.:.|...|.||.| ::||.|.  :...|:.|.:.|..|.:||.|:.:|
  Rat   224 EECGKSFCYLSMLKQH-QRIHSGE--KLYKCEECGKSFCYLSMLKQHQRIH 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1663NP_610521.1 MttA_Hcf106 <33..>91 CDD:294511 7/32 (22%)
C2H2 Zn finger 201..222 CDD:275368 7/20 (35%)
C2H2 Zn finger 259..279 CDD:275368 7/21 (33%)
C2H2 Zn finger 287..307 CDD:275368 9/19 (47%)
C2H2 Zn finger 314..335 CDD:275368 7/20 (35%)
Rsl1XP_006232164.1 KRAB 5..63 CDD:214630 12/69 (17%)
KRAB 5..44 CDD:279668 7/34 (21%)
C2H2 Zn finger 83..103 CDD:275368 2/22 (9%)
C2H2 Zn finger 111..131 CDD:275368 7/20 (35%)
zf-H2C2_2 124..148 CDD:290200 10/24 (42%)
C2H2 Zn finger 139..159 CDD:275368 7/20 (35%)
COG5048 161..525 CDD:227381 40/116 (34%)
C2H2 Zn finger 167..187 CDD:275368 7/21 (33%)
zf-H2C2_2 179..202 CDD:290200 10/24 (42%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
zf-H2C2_2 207..230 CDD:290200 8/22 (36%)
C2H2 Zn finger 223..243 CDD:275368 7/20 (35%)
zf-H2C2_2 235..258 CDD:290200 8/25 (32%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
zf-H2C2_2 263..286 CDD:290200 4/9 (44%)
C2H2 Zn finger 279..299 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
zf-H2C2_2 347..371 CDD:290200
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
C2H2 Zn finger 414..434 CDD:275368
zf-H2C2_2 426..449 CDD:290200
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 498..518 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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