DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1663 and LOC680200

DIOPT Version :9

Sequence 1:NP_610521.1 Gene:CG1663 / 36012 FlyBaseID:FBgn0033449 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_038946368.1 Gene:LOC680200 / 680200 RGDID:1594231 Length:491 Species:Rattus norvegicus


Alignment Length:337 Identity:83/337 - (24%)
Similarity:131/337 - (38%) Gaps:68/337 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YISNQPHKAFYSLQRTSPGVIQYFIQQLRRH---KFFWITEHG--------INKKDRMDSSQKV- 135
            |...:.||:|.|  |:|     .||.| :.|   |.|...|.|        :.:..|:.|.:|: 
  Rat   155 YKCKECHKSFSS--RSS-----LFIHQ-KNHTDEKNFKCEECGRSFYYPSMLKQHQRIHSGEKLY 211

  Fly   136 -----AEALFHRFHFQLDPKVVNASARFLQVWFERQY-----------------VMQLSSSDFRC 178
                 .:|.:       ||..:....|...|....:|                 .:......|:|
  Rat   212 KCGECGKAFY-------DPSFLKQHQRIFCVEKHSKYEECGKVFSSALTLNQHKEIHTGEKPFQC 269

  Fly   179 -------RYPKYYHSLLKFMPTNHISVT--ICEECDRRFLNERLLRLHKFRVHGGPNPNVCHVCH 234
                   |:|    |.|:...|.|....  .||||.|.:.:...||.|:. :|...|.|.|..|.
  Rat   270 GKCHKAFRHP----SALRIHMTVHTGEKPYKCEECGRCYFSSLSLRRHQI-IHSEDNSNKCEECG 329

  Fly   235 QSFPLASKLEQHQARYHFKRPEWQCSRCDYNAPSKWDFQQHQAMHAGQRNYICELCGHSSKTSSA 299
            :.|..:|.|.:||. .|.:...::|..|.....|.:..::||.:|:....|.||.|......|::
  Rat   330 RCFSSSSCLRRHQT-IHSEDKTYKCDECGRYYSSSFSLRRHQVIHSEDNPYKCEECDKRFTYSAS 393

  Fly   300 LAVHRRTHDQPK-LCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLHKL 363
            |..|:..|...| ..|.:|.:.||.:|:|:.| :.:|.|.  :...|:.|.|.|.....|:.|:.
  Rat   394 LQEHQTIHTGEKPYKCENCHKAFRHHSSLRKH-KIVHTGE--KPYKCEECGRCFSRYSYLRRHQE 455

  Fly   364 VHLQSEEMESYE 375
            :|.:.......|
  Rat   456 IHSEGNPQTCVE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1663NP_610521.1 MttA_Hcf106 <33..>91 CDD:294511 2/7 (29%)
C2H2 Zn finger 201..222 CDD:275368 8/20 (40%)
C2H2 Zn finger 259..279 CDD:275368 5/19 (26%)
C2H2 Zn finger 287..307 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..335 CDD:275368 7/20 (35%)
LOC680200XP_038946368.1 KRAB 2..82 CDD:214630
SUF4-like 125..>173 CDD:411020 8/24 (33%)
C2H2 Zn finger 129..150 CDD:411020
C2H2 Zn finger 129..149 CDD:275368
COG5048 152..>445 CDD:227381 78/313 (25%)
C2H2 Zn finger 157..177 CDD:275368 9/27 (33%)
C2H2 Zn finger 185..205 CDD:275368 3/19 (16%)
C2H2 Zn finger 213..232 CDD:275368 3/25 (12%)
C2H2 Zn finger 242..261 CDD:275368 0/18 (0%)
C2H2 Zn finger 269..289 CDD:275368 6/23 (26%)
C2H2 Zn finger 297..317 CDD:275368 8/20 (40%)
C2H2 Zn finger 325..345 CDD:275368 7/20 (35%)
C2H2 Zn finger 353..373 CDD:275368 5/19 (26%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 7/20 (35%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 465..485 CDD:275368 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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