DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1663 and Meics

DIOPT Version :9

Sequence 1:NP_610521.1 Gene:CG1663 / 36012 FlyBaseID:FBgn0033449 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:418 Identity:108/418 - (25%)
Similarity:159/418 - (38%) Gaps:92/418 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NADEDE-IQDEVQVEMTNLLAASIAQESKLAEVQESFKNVEFMEEEVEPNFSPEKEQGHDELASN 78
            |..|.| :|:..::.|.:     |..|.::: :||:|::. |.||....|...|:|.. |:....
  Fly   158 NGQESEPLQEVFEITMND-----IKTEDEVS-IQETFEDA-FDEENDNNNTDSEREDS-DQWTVG 214

  Fly    79 SHHD----YI-----------SNQPHKAFYSLQRTSPGVIQYFIQQLRRHKFFWITEHGINKKDR 128
            |..|    :|           :||      ||..|..||.....:.|.||    :.:|    |::
  Fly   215 STEDQDEPWIPGGGGRQTVGGNNQ------SLLCTECGVSYSTQKALARH----VAKH----KEQ 265

  Fly   129 MDSSQKVAEALFHRFHFQLDPKVVNASARFLQVWFERQYVMQLSSSDFRCRY-PK-YYH--SLLK 189
            .| :||.....|....|:.:.::.....|            ......|:|.. || |.|  :|..
  Fly   266 GD-TQKPHLCDFCGRGFRTNAQLTTHRRR------------HTGERPFKCPLCPKAYTHGPTLKS 317

  Fly   190 FMPTN-----HISVTICEECDRRFLNERLLRLHKFRVHGGPNPNVCHVCHQSFPLASKLEQHQAR 249
            .|.|:     |    .|.:||:.|.....||.|..| |.|..|..|..|.|:|...|.|:.| :|
  Fly   318 HMHTHDEEKGH----KCPQCDKTFYTRGNLRAHIQR-HTGERPYKCPDCPQTFAKNSGLKLH-SR 376

  Fly   250 YHFKRPEWQCSRCDYNAPSKWDFQQHQAMHAGQRNYICELCGHSSKTSSALAVHRRTHDQPK-LC 313
            .|.:...::|..|............|..:|.|.|.:.|..|..|....|.:..|:|||...| ..
  Fly   377 LHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFK 441

  Fly   314 CPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLHKLVH------------- 365
            |..|.:.|..|..||||:| ||.|.  :...||.|.:.|...:.|..|.|.|             
  Fly   442 CEECGQAFSHNHHLKSHLR-IHTGE--KPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQC 503

  Fly   366 ---------LQSEEMESYEDDDPEELNR 384
                     |:..|......|:|:.|::
  Fly   504 PKAYDTQQSLRGHEKTHKNPDEPKTLHQ 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1663NP_610521.1 MttA_Hcf106 <33..>91 CDD:294511 17/72 (24%)
C2H2 Zn finger 201..222 CDD:275368 8/20 (40%)
C2H2 Zn finger 259..279 CDD:275368 3/19 (16%)
C2H2 Zn finger 287..307 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..335 CDD:275368 9/20 (45%)
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 6/23 (26%)
C2H2 Zn finger 274..294 CDD:275368 3/31 (10%)
zf-H2C2_2 287..311 CDD:290200 6/35 (17%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 8/20 (40%)
zf-H2C2_2 342..366 CDD:290200 10/24 (42%)
C2H2 Zn finger 358..378 CDD:275368 8/20 (40%)
C2H2 Zn finger 386..406 CDD:275368 3/19 (16%)
COG5048 <395..583 CDD:227381 38/140 (27%)
zf-C2H2 412..434 CDD:278523 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 426..451 CDD:290200 8/24 (33%)
C2H2 Zn finger 442..462 CDD:275368 9/20 (45%)
zf-H2C2_2 454..478 CDD:290200 11/26 (42%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368 2/19 (11%)
C2H2 Zn finger 532..552 CDD:275370 108/418 (26%)
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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