DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a3

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:586 Identity:210/586 - (35%)
Similarity:328/586 - (55%) Gaps:36/586 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YVGSLNASTISIPGAYKPNE-------SSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDS 76
            ::.|::.|:    .|..|.|       ..||.:..|  |....|..|..:.:.......|::|::
Zfish    20 HMSSVSGSS----SAAGPREVELVLVKEQNGVQFTS--SSLRNPGAHSHTHTHTHTHPSGQQRET 78

  Fly    77 WNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRG 141
            |...|:||:|.|..:|.|.||||||:...:||||||::|||:.:::.|.|::|:|:.|||::..|
Zfish    79 WGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQYNREG 143

  Fly   142 SVKVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT-ECLDS 205
            :..|:...||.:|:|:..:|.:..|.:||..::|..|.|...||...|||.:|...|.: .|.|.
Zfish   144 AAGVWKICPIFKGVGFTVILISLYVGSYYNVIIAWALFYLFSSFSGELPWIHCNNTWNSPNCSDP 208

  Fly   206 GPQEASRATSLAGSGVRTTSAEFYFTNIIL--REKASIDDGIGYPSWSLALALAVAWIVIAGIMF 268
            .       .:|.....:||.|..||...:|  .|.:.||| :|.|.|.|...|||..:|:...::
Zfish   209 N-------ATLLNDTYKTTPALEYFERGVLHVHESSGIDD-LGAPRWQLTACLAVVIVVLYFSLW 265

  Fly   269 KGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFS 333
            ||||:|||..:..|..||||:.|||:|.:|||||.||:..:|...:.:|.:.|||..|.||:.||
Zfish   266 KGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAIDGIKAYLSVDFLRLYDAQVWIEAATQICFS 330

  Fly   334 LAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNG 398
            |.:.||.:|.::|||:|.:|.||||.|.:::::.||..||.:||..||.::.::|.. :..|...
Zfish   331 LGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGFVIFSFLGYMSQKHNVA-LDKVATD 394

  Fly   399 GPGLAFISYPDAIAKFKWLP--QLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQF----GHLKN 457
            ||||.||.||:|||.   ||  .:::|:||:||..|||.|.:|....:.|.:.|:|    .|.:.
Zfish   395 GPGLVFIIYPEAIAT---LPGSSVWAVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLHKHREL 456

  Fly   458 WTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEF 522
            :|:.  |.:..:.:.|:.:|.||.::..|:|:|......|...:.|.:.|||.|||.|...|:|.
Zfish   457 FTLF--IVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVDRFSDDIEE 519

  Fly   523 MIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFW 587
            |||.:..||:|:||..|:|..:|.:::.:...:.|.||..|.:.:...:.|||||...:..|..:
Zfish   520 MIGQRPGLYWRLCWKFVSPCFLLFMVVVSFATFNPPKYGSYYFPTWATMVGWCLSISSMIMVPLY 584

  Fly   588 A 588
            |
Zfish   585 A 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 186/485 (38%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 198/524 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.