DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and slc6a17

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:672 Identity:210/672 - (31%)
Similarity:336/672 - (50%) Gaps:120/672 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ISIPGAYKPNESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSV 92
            :..|..||.::.|     ::...|||||.|..|....:|.|:|     :||:.::::::.:..||
Zfish    27 LEAPMDYKSSQMS-----MNMTGGSAPPIGKPDISPDLEDGRP-----AWNSKLQYILAQVGFSV 81

  Fly    93 GLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDF-SPIMRGIG 156
            |||||||||:...:|||||:::||.|:|||:|.|:::||:.:||...|||:.|::: .|.:.|||
Zfish    82 GLGNVWRFPYLCQKNGGGAYLVPYFILLILIGIPLFFLELAVGQRIRRGSIGVWNYVCPRLGGIG 146

  Fly   157 YGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYC--REEWGTECLDSGPQEASRATSLAGS 219
            ...::..|.|..||..::..::.||..||...||||.|  |:. |::.:.....|.|.||:    
Zfish   147 ASSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSDCPIRKN-GSQAIVEPECEKSSATT---- 206

  Fly   220 GVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALF 284
                    :::....|...::|.|..|. :|.:.|:|..|||::...:.||::||||..||.:||
Zfish   207 --------YFWYRETLNITSTIADSGGL-NWRMTLSLLAAWIIVCLAVIKGIQSSGKVMYFSSLF 262

  Fly   285 PYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNR 349
            ||||:...|||.|.|.||.||:.:...|:...:||||||..|.|||||:|.:.||.:|.::|||:
Zfish   263 PYVVLFCFLVRGLFLKGAVDGIAHMFTPKLEIMLEPQVWREAATQVFFALGLGFGGVIAFSSYNK 327

  Fly   350 FGHNIYRDANIVTTLDTFTSLLSGVIIFGILG-----------------NLAYENN--------- 388
            ..:|.:.||.:|:.::..||:|:.:::|.:||                 .|.|.|:         
Zfish   328 RDNNCHFDAVLVSVINFLTSILATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSHDLIP 392

  Fly   389 ---------TTDIASVVN----------------------------GGPGLAFISYPDAIAKFKW 416
                     |:|.|.:..                            .|.|||||::.:|:..|..
Zfish   393 PHVNFSHLTTSDYAEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGLAFIAFTEAMTHFPA 457

  Fly   417 LPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHLKNWTVVVGIAIVGYFLGLLYITPGGQ 481
            .| .:||:||.||..||:||.:|..:.::|.|.|.|...|.: :.||..||.:..|||::...|.
Zfish   458 SP-FWSVMFFFMLINLGLGSMIGTMTGITTPILDTFKIRKEY-LTVGCCIVAFLCGLLFVQRSGN 520

  Fly   482 FLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLT 546
            :.:.:.|.:.......::.|.|.|::|||||.||..:|:|.|:|.:....|...|..|:|:.::.
Zfish   521 YFVTMFDDYSAGLPLTIVVILENVSVAWIYGTKRFMQDLEDMLGFRPYSVYFYLWKYVSPVCLII 585

  Fly   547 ILIYTLV--LYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHLGLWARIRKAF 609
            ::..::|  ...||.|..:.....:..|    .::..     |||         :..:|.|..|.
Zfish   586 LISASVVEMAISPLGYNAWVQDLAMERF----QSYPP-----WAI---------VMCFALIIVAM 632

  Fly   610 EPLP--------NWGPSDPQTL 623
            .|||        ||.|.....|
Zfish   633 LPLPLVFIARHFNWLPDGSNKL 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 178/542 (33%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 196/626 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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