DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and Slc6a21

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_006541333.1 Gene:Slc6a21 / 76713 MGIID:1923963 Length:749 Species:Mus musculus


Alignment Length:705 Identity:163/705 - (23%)
Similarity:304/705 - (43%) Gaps:154/705 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MNQAYVGSLNASTISIPGAYKPNESSNGKKTLSEGSGS-----APPPGHGDSPSGVEAGQPGKKR 74
            |:|::...|......:...:..::.|:...::|.|..:     ...|.|..:          ||.
Mouse     1 MDQSFEDFLELKNKPVEEVHTASKKSDNPTSVSRGFRTREVRVTKIPNHFQA----------KKT 55

  Fly    75 DSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSS 139
            ::       ::..:|.|:|||:.||||:...:||||:|::.|.|:|:|:|.|:.|:||::||:..
Mouse    56 EN-------ILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYFILLLLLGIPLMYMEMVIGQWLR 113

  Fly   140 RGSVKVYDF-SPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSF-YPTLPWSYC------RE 196
            ..:::.:.: .|.:.|:||..:||..:|..|.:.|::.:|.|...|| || |||..|      ..
Mouse   114 MDNIQAWKYLVPWLSGVGYSNILACVLVVLYNSALVSWSLFYLGQSFDYP-LPWQNCPLVENLSM 177

  Fly   197 EWGTECLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWI 261
            ..|..||.|.|.                  ::::.:.:|:....:::||.....::.|.|...||
Mouse   178 VAGNTCLWSEPH------------------QYFWYHTLLQASNQMEEGIEVLVLNVTLCLFATWI 224

  Fly   262 VIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEP-QVWYA 325
            .:...|...:|.|.....|..||..|::|...:|.|.|.|:....|:.|......:|.. ..|..
Mouse   225 FLYVTMVTRIKISVLMMIFSILFSNVLLLCFFIRTLFLNGSVRASLWRLVTIELSILSSLDAWRQ 289

  Fly   326 AVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGIL-------GNL 383
            |...|.:||.:..|.||.:::|...|.|..:.|:.|..::..|||||..:||.::       |.:
Mouse   290 AGGHVLYSLGLGMGTIITFSTYQPRGENYIKWASFVAMVNLATSLLSSFVIFLVMGFWTTTSGTM 354

  Fly   384 AYENNTTDIASVV-NG------------------------------------------------- 398
            ..:.:.:::.::: ||                                                 
Mouse   355 CIKRSVSNLINLIANGVLPKAAWPPGDIIHKPPLEYLAWINQLPNNLKSQVIHQTLPCSILIQKE 419

  Fly   399 ----GPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVI----KDQFGHL 455
                ||||:::::..||:.|.. ...::::||:.|.::|:|:   |.:.:..::    |......
Mouse   420 KIMEGPGLSYVAFSQAISLFPG-SSFWAIIFFMSLAIMGLGT---MLTLLEGIVLPLQKSISTFA 480

  Fly   456 KNWTVVVGIAIVGYFLG-LLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRD 519
            |:..:|..:..:|.||| |::.:..|.:::.|.|...|..|.:::.:.:.:::||:||:||...:
Mouse   481 KHPNLVQVLVCLGGFLGSLVFSSRPGSYVVFLFDDLLVPMVLIIIVVIQNLSLAWLYGIKRFRAE 545

  Fly   520 VEFMIGIKTSLYYRICWAVVT-PLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQ 583
            |...:|......:...|:.|| |.|::.:.||.|.||         |....|...|..|      
Mouse   546 VFGQLGSLVWSPFTFLWSYVTLPTLLVLLTIYFLNLY---------YSGSPYYVSWNDS------ 595

  Fly   584 VLFWAIPAVRKQP---------SHLGLWARIRKAFEPLPNW----GPSDPQTLKR 625
                 :....|||         :.|.:.|.:.....||.:|    .|:..:||::
Mouse   596 -----MSHEVKQPYKKIPLGWVTFLSVLALLPILVYPLQHWWYLDDPNICETLEK 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 135/552 (24%)
Slc6a21XP_006541333.1 SLC5-6-like_sbd 48..622 CDD:382020 150/633 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.