DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and slc6a4a

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:653 Identity:223/653 - (34%)
Similarity:337/653 - (51%) Gaps:71/653 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MNQAYVGSL--------NASTI--SIPGAYKPNESSNGKKTLSEGSGSAPP--PGHGDSPSGVEA 67
            |||.|.|..        |...:  |:|  .|..:|.:|...:|.|..|..|  |..|........
Zfish     9 MNQEYGGEQQKVPESQENGRLVVDSVP--EKDQKSGSGPGQVSNGYRSTSPQSPKEGAGTGTDRV 71

  Fly    68 GQPG-------------KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIV 119
            ..||             ..|::|:..::||:|.|..:|.||||||||:...:||||||::|||::
Zfish    72 NTPGTFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLM 136

  Fly   120 LILVGKPVYYLEMLLGQFSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVD 183
            .:..|.|::|:|:.||||...|.:.:: ...||.:|||:...:....:..||.|:||..|.|.:.
Zfish   137 AVFGGVPLFYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLS 201

  Fly   184 SFYPTLPWSYCREEWGT-ECLDSGPQEASRATSLAGSGVRTT---SAEFYFTNIILREKASIDDG 244
            ||..||||:.|...|.| .|..      ..:|.|..|....:   :.|||...::   :..:..|
Zfish   202 SFRATLPWTTCNNRWNTPNCTH------YLSTDLNVSWTNNSISPAEEFYVRQVL---QVHLSPG 257

  Fly   245 ---IGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGV 306
               :|:.||.|||.|...:.|:...::||||:|||..:..|.|||:|:|:||:|..|||||:.||
Zfish   258 LHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGV 322

  Fly   307 LYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLL 371
            :::|:|.|.|||...||..|..|:||||...||.::.:||||.|.:|.|:||.|.::::..||.|
Zfish   323 VFYLKPDWKKLLTTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFL 387

  Fly   372 SGVIIFGILGNLAYENNTTDIASVV-NGGPGLAFISYPDAIAKFKWLP--QLFSVLFFLMLFVLG 433
            ||.:||.:||.:| |.....:.:|. :.||.|.||.|.:|||.   :|  ..|:::||||:.:||
Zfish   388 SGFVIFTVLGYMA-EMRQQGVETVAKDAGPSLLFIIYAEAIAN---MPAATFFAIIFFLMIIMLG 448

  Fly   434 IGSNVGMASCMSTVIKDQFGHL----KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTF 494
            :.|.......:.|.:.|:|.||    :.| .|:|:..|.|...|..:|.||.|::.|.:.:....
Zfish   449 LDSTFAGLEGVITAMLDEFPHLLARRREW-FVLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGP 512

  Fly   495 VALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLK 559
            ..:.:...|::.::|.||..|.|.||:.|:|....|::|:||..:.|..:|.|::..|.....:|
Zfish   513 AVITVVFLEVIAVSWFYGTTRFCNDVQLMLGFAPGLFWRVCWIAICPCFLLFIIVSFLAFPPEVK 577

  Fly   560 YKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHL----GLW-ARIRKAFEP-LPNWGPS 618
            ..||.|.....|.|:|     :|...|..:|:.  ...||    |.: .|:.|...| .|  |.|
Zfish   578 LFDYLYPFWTTVLGYC-----IGVSSFICVPSY--MVYHLVTTKGTFQQRLLKGITPEAP--GSS 633

  Fly   619 DPQ 621
            .||
Zfish   634 GPQ 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 181/491 (37%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 198/557 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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