DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a1l

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:512 Identity:175/512 - (34%)
Similarity:291/512 - (56%) Gaps:22/512 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFS 138
            |.||....:||:||:..::|||||||||:...:||||||:|||...|:..|.|::.||..|||::
Zfish    27 RGSWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPLFLLETALGQYT 91

  Fly   139 SRGSVKVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTE-C 202
            |.|.:.|:...|:|:|:|...|:.:..:..||..::|..|.|...|....|||..|...|.|: |
Zfish    92 SVGGLGVWKLIPMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSSLKAELPWQTCDNPWNTDRC 156

  Fly   203 LDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPS---WSLALALAVAWIVIA 264
            .       |..:.|..:.:.:...||:..|:     ..:.:|:..|.   |.|...||::||::.
Zfish   157 F-------SNYSLLDTTNLSSAVTEFWERNM-----HQLTNGLEEPGELRWPLVGTLALSWILVY 209

  Fly   265 GIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQ 329
            ..::|||:.:||..||.|.:||.::.:|..|.:|||||.||||:::.|.::|||:.:||..|.||
Zfish   210 FSIWKGVEWTGKVVYFSATYPYFMLFILFFRGVTLPGAIDGVLFYITPNFNKLLKSEVWLDAATQ 274

  Fly   330 VFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIAS 394
            :|||..:..|::|...|||.|.:|:|||:.||..:::.||:.:|::||.|:|.::|... ..|..
Zfish   275 IFFSYGLGLGSLIALGSYNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGFMSYITK-RPIEE 338

  Fly   395 VVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHL---K 456
            :...||||||::||.|:.:.. :..|:::|||.||.:||:.|.........|.:.|::..:   :
Zfish   339 LAASGPGLAFLAYPQAVTQLP-MSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPTVLRKR 402

  Fly   457 NWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAWIYGVKRLCRDV 520
            ....::.:.:|.:.:|...||.||.::..|.||:..:.:.|: |..||.::|||.||.::..:::
Zfish   403 KKIFILIVCLVSFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISIAWFYGAEKFYKNI 467

  Fly   521 EFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLS 577
            |.|||.:...:::.||...||.:.|.:..::.:...||....|.|.:.....||.:|
Zfish   468 EEMIGYRPCGFWKQCWIYFTPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVGWLMS 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 167/484 (35%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 175/512 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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