DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a16b

DIOPT Version :10

Sequence 1:NP_610517.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001103944.1 Gene:slc6a16b / 567809 ZFINID:ZDB-GENE-070424-95 Length:676 Species:Danio rerio


Alignment Length:643 Identity:185/643 - (28%)
Similarity:301/643 - (46%) Gaps:139/643 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SAPPPGHGDSPS-------GVEAGQP-GKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENG 108
            ||.||...|...       |:|...| ...||.|::.:|:.::.:..|||||||||||:...:||
Zfish     3 SAKPPLPADGQQDEVELRLGLEPEVPLETARDGWDSKVEYFLAQVGFSVGLGNVWRFPYLCHQNG 67

  Fly   109 GGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYAT 172
            ||||::.|::::.|||.|:::||:..||...:||:.|: ..||.:.||||...:....|..||..
Zfish    68 GGAFILLYVVLMALVGVPLFFLELAAGQSIRQGSIGVWRHISPKLVGIGYSSCVVCFFVALYYNV 132

  Fly   173 LMALTLRYFVDSFYPTLPWSYCREEWGT---ECLDSGPQEASRATSLAGSGVRTTSAEFYFTNII 234
            ::..::.|..:||...|||..|..|..:   ||..|.|                 :|.|::    
Zfish   133 IIGWSIFYLGNSFQYPLPWEKCPTEGNSTVKECAASSP-----------------TAYFWY---- 176

  Fly   235 LREKASIDDGI---GYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRA 296
             |:...|.|.|   |..::.|...|..||:::...|:||:|||||..||.::|||||:|..|:|.
Zfish   177 -RKALDITDSIDETGEFNFILTGCLLAAWVIVCLAMYKGIKSSGKVMYFSSVFPYVVLLCFLIRG 240

  Fly   297 LTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIV 361
            :||.||.:|:.:...|:.....:.|||..|.|||||:|.:.||::|.|:|||...:|.:|||..|
Zfish   241 VTLDGASEGIKFMFYPRLEIWADVQVWRQAATQVFFALGLGFGSVIAYSSYNPRNNNCHRDAFTV 305

  Fly   362 TTLDTFTSLLSGVIIFGILG----NLAYE---NNTTDIASVVNGGP------------------- 400
            :.::..||:|:.:::|.:||    .:|.|   .|...:..|.:..|                   
Zfish   306 SGVNFMTSVLATLVVFAVLGFRAKTIAAECVKRNLKALLKVTSSAPLPVLSINASDVESISLDEY 370

  Fly   401 ----------------------------------GLAFISYPDAIAKFKWLPQLFSVLFFLMLFV 431
                                              |||||::.:|:..|...| .:|.||||||..
Zfish   371 ANWYSTQGMELSISDYNITACSLEDELRQGVEETGLAFIAFTEAMTLFPGSP-FWSALFFLMLLN 434

  Fly   432 LGIGSNVGMASCMSTVIKDQFGHLKNWTVVVGI--AIVGYFLGLLYITPGGQFLLNLVDYFGVTF 494
            ||:.:..|..:.:.|.:.|.|..|:|..::..|  ..||:.:||::....|.:.:.:.|.:..|.
Zfish   435 LGLSTMFGTMAGILTPLTDTFKTLRNHKLIFTICSCTVGFVIGLVFTQRCGNYFVTMFDDYSATL 499

  Fly   495 VALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLK 559
            ..:::.||:.::::|:||..|...|::.|:.....:.|:..|..|.|:.||.:|..:|       
Zfish   500 PLIIVVIFQTISVSWVYGADRFLEDLKQMLNRPVPVIYKYLWKFVCPIAMLGLLGASL------- 557

  Fly   560 YKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHLGLWARIRKAFE--PLPNW 615
                                         :..:.|:|.: ..|.|.:.:.|  |.|:|
Zfish   558 -----------------------------LKMILKRPEY-SAWNREKASKEDLPYPDW 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_610517.1 SLC6sbd 75..552 CDD:271359 167/545 (31%)
slc6a16bNP_001103944.1 SLC6sbd-B0AT-like 33..607 CDD:271364 177/613 (29%)

Return to query results.
Submit another query.