DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a15

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001232001.1 Gene:slc6a15 / 565315 ZFINID:ZDB-GENE-050420-93 Length:741 Species:Danio rerio


Alignment Length:598 Identity:189/598 - (31%)
Similarity:306/598 - (51%) Gaps:106/598 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTAL 105
            |.:|.:.|||..             |..:..::|.:|.:.::::::.:..|||||||||||:...
Zfish    48 NKQKDVEEGSEE-------------EEEEEEEERPAWGSKLQYILAQVGFSVGLGNVWRFPYLCQ 99

  Fly   106 ENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDF-SPIMRGIGYGQVLATGIVTTY 169
            :|||||:::||||:|:|:|.|:::||:.:||...|||:.|::: ||.:.|||:...|....|..|
Zfish   100 KNGGGAYLVPYLILLLLIGIPLFFLELAVGQRIRRGSIGVWNYISPHLGGIGFASCLVCFFVALY 164

  Fly   170 YATLMALTLRYFVDSFYPTLPWSYC---REEWGT----ECLDSGPQEASRATSLAGSGVRTTSAE 227
            |..::..:|.||..||...|||..|   :.:..|    ||      |.|.||:            
Zfish   165 YNVIIGWSLFYFSQSFQQPLPWHECPLVKNKTNTYIEPEC------EKSSATT------------ 211

  Fly   228 FYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVL 292
            :|:..:.|....||.:|.|. :|.:.|.|..||.::...|.||::||||..||.:||||||::..
Zfish   212 YYWYRVALDISDSISEGGGL-NWRMTLCLLAAWTMVCLAMIKGIQSSGKVMYFSSLFPYVVLICF 275

  Fly   293 LVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRD 357
            |.||..|.|:.||:::...|:...:|||:||..|.|||||:|.:.||.:|.::|||:..:|.:.|
Zfish   276 LARAFLLKGSVDGIIHMFTPKLEIMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFD 340

  Fly   358 ANIVTTLDTFTSLLSGVIIFGILGNLA-------YENNTTDI----------------------- 392
            |.:|:.::.|||:|:.:::|.:||..|       .|.||..|                       
Zfish   341 AVLVSFINFFTSVLATLVVFAVLGFKANIMNAKCVEMNTKKIIGFLGKEINPGLIPHHINFSQVS 405

  Fly   393 -------ASVVNG-------------------------GPGLAFISYPDAIAKFKWLPQLFSVLF 425
                   .:::.|                         |.|||||::.:|:..|...| .:||:|
Zfish   406 PEDYQQMTNIIQGVMENDYPRLGLDNCDIKEELNKAVQGTGLAFIAFTEAMTHFPASP-FWSVMF 469

  Fly   426 FLMLFVLGIGSNVGMASCMSTVIKDQFGHLKNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYF 490
            ||||..||:||..|....:.|.|.|.|...|.: :.||..::.:|:||.::...|.:.:.:.|.:
Zfish   470 FLMLVNLGLGSMFGTIQGILTPIVDTFKVRKEY-LTVGCCVLAFFIGLTFVQRSGNYFVAMFDDY 533

  Fly   491 GVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVL- 554
            ..|...|::.:.|.:.:||:||..:...|::.|:|.....||...|..|||:|:|.:|..:::. 
Zfish   534 SATLPLLIVVLLENIAVAWVYGTDKFFEDLKDMLGFTPYRYYYYMWKFVTPVLLLGLLAASVIQL 598

  Fly   555 -YEPLKYKDYTYQ 566
             ..|..|..:..|
Zfish   599 GLAPPSYSAWNQQ 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 179/546 (33%)
slc6a15NP_001232001.1 SLC5-6-like_sbd 68..646 CDD:294310 183/565 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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