DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and si:ch211-132b12.6

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001038523.1 Gene:si:ch211-132b12.6 / 564583 ZFINID:ZDB-GENE-050420-179 Length:577 Species:Danio rerio


Alignment Length:544 Identity:197/544 - (36%)
Similarity:306/544 - (56%) Gaps:29/544 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQ 136
            ::|..|....|||::.....||||||||||:....||||.|:||||:.::..|.|::.||..:||
Zfish     9 EERGFWGKKAEFLLAVAGNVVGLGNVWRFPYLCYRNGGGVFLIPYLVFVVTCGLPLFLLETAMGQ 73

  Fly   137 FSSRGSVKVYD-FSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT 200
            |:..|.:..:. ..|:.:|:||...|.......||..::|..|.|.|.||...|||..|...|.|
Zfish    74 FTHEGGITCWHRLCPLAQGVGYAGQLTVLYSCMYYTIILAWALFYLVSSFSSQLPWVSCNNIWNT 138

  Fly   201 E-C--LDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIV 262
            : |  |.:|....:| |:||.|   |::|..::...:|.....|:| ||..:|.:.|.|...||:
Zfish   139 DNCVNLAAGNLTFNR-TTLANS---TSAATEFWERRVLSLSGGIED-IGKINWEILLCLIAMWII 198

  Fly   263 IAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAV 327
            ....::|||||:||..||.|.||||::||||:|.||||||..||:::|.|:..:|.:||||..|.
Zfish   199 CYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWMEAG 263

  Fly   328 TQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDI 392
            ||||||.::|.|.:|...|||::.:|.|||:..:..|::.||.::|..:|.:||.:|:... ..:
Zfish   264 TQVFFSYSVCSGILISLGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAVFSVLGFMAHVQG-VPV 327

  Fly   393 ASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHL-- 455
            ..|...|||||||:||.|:|...: |||::|.||:|:.:||:.|......|:.|.:.|.|..:  
Zfish   328 EEVAESGPGLAFIAYPQAMAMMPF-PQLWAVCFFIMIILLGLDSQFVGIECVITSVMDLFPEVLR 391

  Fly   456 ---KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAWIYGVKRL 516
               :....|:.:.:..:|..|:.:|.||.::..|.|.:......|: |::||.:.|.|::|.:::
Zfish   392 RAGRRELFVLLLCLTCFFGQLIMVTEGGMYVFQLFDNYACNGACLLFLSVFESLAIGWLFGAEKM 456

  Fly   517 CRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKY-KDYTYQSGVYVFGWCLSAFG 580
            ...:|.|...:.:.::.:||..:|||:.|...:|::|.|.||.: :.|.|....|..||.|:...
Zfish   457 FDIIEDMTESRPNYWFMLCWKYLTPLVSLMSFVYSMVRYTPLTFNRWYVYPDWAYALGWLLALSS 521

  Fly   581 VGQVLFWAIPAVRKQPSHLG-LWA 603
            :..|..||          || :||
Zfish   522 ILLVPGWA----------LGQMWA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 179/486 (37%)
si:ch211-132b12.6NP_001038523.1 SLC6sbd-TauT-like 11..550 CDD:271387 197/542 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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