DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and SLC6A20

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001372612.1 Gene:SLC6A20 / 54716 HGNCID:30927 Length:603 Species:Homo sapiens


Alignment Length:585 Identity:178/585 - (30%)
Similarity:293/585 - (50%) Gaps:90/585 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQ 136
            |.|..|.|.::|:.:||:.:||||||||||:.....|||:|::||:|:||:.|.|:.|||:.:||
Human     3 KARPLWANSLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQ 67

  Fly   137 FSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT 200
            ...:||:..: ..||.:.|:|...|:.:..::.||..:.|....|...||...||||.|......
Human    68 RMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWAFWYLFHSFQDPLPWSVCPLNGNH 132

  Fly   201 ECLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAG 265
            ...|...::||             |.::::....|....|:.:. |...|..||.|.:||:|:..
Human   133 TGYDEECEKAS-------------STQYFWYRKTLNISPSLQEN-GGVQWEPALCLLLAWLVVYL 183

  Fly   266 IMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRP-----------QWHKLLE 319
            .:.:|.:|:||..||.|..||.|:::.|:|.|||.||.:|::|...|           |..:|..
Human   184 CILRGTESTGKVVYFTASLPYCVLIIYLIRGLTLHGATNGLMYMFTPKGSSALSLLAFQIEQLAN 248

  Fly   320 PQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLA 384
            |:.|..|.||:||||.:.||::|.:||||...:|..:.|.||:.:::|||:.:.::.|.|.|..|
Human   249 PKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSLINSFTSIFASIVTFSIYGFKA 313

  Fly   385 ---YEN----------NTTDI---------ASVVNG----------------------------- 398
               |||          ||.|:         ...|.|                             
Human   314 TFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTA 378

  Fly   399 --GPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQ---FGHLKNW 458
              |.|||||.|.:||...: :.||:|||:|.||.:|||||.:|..:.:.|.:.|.   ..||...
Human   379 VQGTGLAFIVYTEAIKNME-VSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKIISSHLPKE 442

  Fly   459 TVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFM 523
            .:...:.:|...:|:::....|.:..::.:.:..|...|::.:.|.:.:.::||::|...|::.|
Human   443 AISGLVCLVNCAIGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLKAM 507

  Fly   524 IGIKTSLYYRICWAVVTPLLMLTILIYTL---VLYEPLKYKDYTYQSGVYVF----GWCLSAFGV 581
            .|...|.|:::.||.|:|||::::.::.|   :|...|||:.:....|..|.    .:.|:..|:
Human   508 TGRAVSWYWKVMWAGVSPLLIVSLFVFYLSDYILTGTLKYQAWDASQGQLVTKDYPAYALAVIGL 572

  Fly   582  581
            Human   573  572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 167/544 (31%)
SLC6A20NP_001372612.1 SLC6sbd_SIT1 2..588 CDD:271401 178/585 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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