DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a8

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_059044.1 Gene:Slc6a8 / 50690 RGDID:619711 Length:635 Species:Rattus norvegicus


Alignment Length:616 Identity:223/616 - (36%)
Similarity:342/616 - (55%) Gaps:55/616 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GAYKPNESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKK-----RDSWNNDIEFLMSCIALS 91
            |.|  :.|.:.||.....||....|..||.|:|:  |.|..:     |::|...::|:|||:..:
  Rat     9 GIY--SVSGDEKKGPLIVSGPDGAPSKGDGPAGL--GAPSSRLAVPPRETWTRQMDFIMSCVGFA 69

  Fly    92 VGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDFSPIMRGIG 156
            ||||||||||:...:||||.|:|||:::.::.|.|:::||:.||||...||:.|::..|:.:|:|
  Rat    70 VGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVWNICPLFKGLG 134

  Fly   157 YGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT-ECLDSGPQEASRATSLAG-- 218
            |..::......|||..::|....|.|.||..||||:.|...|.| :|::....|.....|||.  
  Rat   135 YASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHEDCANASLANLT 199

  Fly   219 ----SGVRTTSAEFYFTNIILREKASIDDGIGYP---SWSLALALAVAWIVIAGIMFKGVKSSGK 276
                :..|:...||: .|.:||    :..|:..|   :|.:.|.|...|:::...::|||||:||
  Rat   200 CDQLADRRSPVIEFW-ENKVLR----LSTGLEVPGALNWEVTLCLLACWVLVYFCVWKGVKSTGK 259

  Fly   277 ASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNI 341
            ..||.|.|||||::|||||.:.||||.||::|:|:|.|.||..||||..|.||:|||.||..|.:
  Rat   260 IVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGSPQVWIDAGTQIFFSYAIGLGAL 324

  Fly   342 IMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLAFIS 406
            ....|||||.:|.|:||.|:..:::.||..:|.::|.|||.:|.|.. ..|:.|...|||||||:
  Rat   325 TALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMATEQG-VHISKVAESGPGLAFIA 388

  Fly   407 YPDAIAKFKWLPQLFSVLFFLMLFVLGIGSN-VGMASCMSTVI-----KDQFGHLKNWTVVVGIA 465
            ||.|:......| |::.|||.||.:||:.|. ||:...::.::     ...|...:..:|.:..|
  Rat   389 YPRAVTLMPVAP-LWAALFFFMLLLLGLDSQFVGVEGFITGLLDLLPASYYFRFQREISVALCCA 452

  Fly   466 IVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAWIYGVKRLCRDVEFMIGIKTS 529
            :. :.:.|..:|.||.::..|.||:..:...|: .|.:|.|.:||:||..|...|:..|||.:..
  Rat   453 LC-FVIDLSMVTDGGMYVFQLFDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPC 516

  Fly   530 LYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFW--AIPAV 592
            .:.:.||:..|||:.:.|.|:.:|.|:||.|      :..||:.|.      |:.:.|  |:.::
  Rat   517 PWMKWCWSFFTPLVCMGIFIFNVVYYKPLVY------NNTYVYPWW------GEAMGWAFALSSM 569

  Fly   593 RKQPSH-LGLWARIR----KAFEPL--PNWG 616
            ...|.| ||...|.:    :.::.|  |.||
  Rat   570 LCVPLHLLGCLLRAKGTMAERWQHLTQPIWG 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 188/493 (38%)
Slc6a8NP_059044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 14/41 (34%)
SLC6sbd_CT1 52..621 CDD:271397 209/569 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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