DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a12

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:570 Identity:221/570 - (38%)
Similarity:322/570 - (56%) Gaps:35/570 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQ 136
            |.|..|.|.:||::|.....:|||||||||:...:||||||.|||.|.....|.||::||:.|||
  Rat    48 KDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQ 112

  Fly   137 FSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT 200
            :||:|||..: ...|:::|||...|:....:..||..::|..|.|...||...|||:.|...|.|
  Rat   113 YSSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNT 177

  Fly   201 E-CLDSGPQEASRATSLAGSGVRTTSAEFYFTNIIL----REKASIDDGI---GYPSWSLALALA 257
            | |:|.....::||.|.:.:          ||:.::    |....|..||   |...|.|||.|.
  Rat   178 EHCVDFLNYSSTRAASYSEN----------FTSPVMEFWERRVLGITSGIHDLGSLRWELALCLL 232

  Fly   258 VAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQV 322
            :|||:....::|||||:||..||.|.|||:::::||:|.:|||||:.|::::|:|...:|.:|||
  Rat   233 LAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYLKPDLLRLKDPQV 297

  Fly   323 WYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYEN 387
            |..|.||:|||.|||.|.:....|||::.:|.|||:..:..|::.||.::|.::|.|||.:|.|.
  Rat   298 WMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMAQEQ 362

  Fly   388 NTTDIASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQF 452
            . ..|:.|...|||||||::|.|:.... |.||:|.||||||..||:.|......|:.|...|.|
  Rat   363 G-VPISEVAESGPGLAFIAFPKAVTMMP-LSQLWSCLFFLMLLFLGLDSQFVCMECLVTASMDMF 425

  Fly   453 GHL-----KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAWIY 511
            ...     :...:::.:|||.|.:|||.:|.||.::..|.||:..:.:.|: |::||::.|.|:|
  Rat   426 PQQLRKRGRRELLILAVAIVCYLMGLLLVTEGGMYIFQLFDYYASSGICLLFLSLFEVICIGWVY 490

  Fly   512 GVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKD-YTYQSGVYVFGWC 575
            |..|...:||.|||.:.....:|.|..:||.|.|....::|..|.||||.: |.|.|..|..||.
  Rat   491 GADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNVYIYPSWGYSIGWL 555

  Fly   576 LSAFGVGQV-LFWAIPAVRKQPSHLGLWARIRKAFEP---LPNWGPSDPQ 621
            |:...:..| ||..|..::.|.|   ...|:::...|   ||..|...||
  Rat   556 LAFSSMACVPLFIIITLLKTQGS---FKKRLQRLITPDPSLPQPGRRSPQ 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 193/491 (39%)
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:294310 214/554 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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