DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a9

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:609 Identity:220/609 - (36%)
Similarity:354/609 - (58%) Gaps:49/609 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGK-----KRDSWNNDIEFLMSCIALSVGLGN 96
            :||:.....:::.:|:.|             |:|.|     :|.:|.|.|||:::.:..:|||||
Zfish     2 SESNTTAAVMADQNGAVP-------------GEPVKRDENSRRGNWGNQIEFVLTSVGYAVGLGN 53

  Fly    97 VWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDFSPIMRGIGYGQVL 161
            |||||:....||||||:.||.|:|:..|.|:::||:..|||:|.|.:.|:..||:.:|:|||.::
Zfish    54 VWRFPYLCYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMV 118

  Fly   162 ATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT-ECLDSGPQEASRAT------SLAGS 219
            .:..:..||..::.:...||..|....|||:||...|.| :|  ||.....||.      |...|
Zfish   119 VSTYIGIYYNVVICIAFYYFFMSMTNLLPWTYCNNPWNTPDC--SGVVSTHRANATFANMSAVVS 181

  Fly   220 GV--------RTTSAEFYFTNIILREKASIDDGIG-YPSWSLAL--ALAVAWIVIAGIMFKGVKS 273
            ||        ||:.:|.|:.|.:|    :|.|||| :....|.:  .|||:|.|:...:.:||||
Zfish   182 GVTEIVNRTKRTSPSEEYWRNYVL----NISDGIGNFGEVRLPILGCLAVSWFVVFLCLIRGVKS 242

  Fly   274 SGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICF 338
            |||..||.|.|||||:.:|.:|.:||.||..|:.|:|.|||.|:|:.:||..|.:|:|:||...:
Zfish   243 SGKVVYFTATFPYVVLTILFIRGITLDGAISGIKYYLTPQWQKILDAKVWGDAASQIFYSLGCAW 307

  Fly   339 GNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLA 403
            |.:|..||||:|.:|.:||:.|::..:..||:.:|.:||.|||.:|:... .|::.|.:.|||||
Zfish   308 GGLITMASYNKFHNNCFRDSIIISVTNCGTSVYAGFVIFSILGFMAHHLG-VDVSEVADHGPGLA 371

  Fly   404 FISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGH---LKNWT-VVVGI 464
            |::||:|:......| |:|:|||.||.:||:|:...:...:.|.:.|:.|.   :||.| |.:|:
Zfish   372 FVAYPEALTLLPISP-LWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGTDWIIKNKTYVTLGV 435

  Fly   465 AIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTS 529
            ||:|:.||:...|..|.:.|.|:|.:..:|..::::....:.|.::||.|...:|||.|:|....
Zfish   436 AIIGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICIMYVYGHKNYFKDVEMMLGFPPP 500

  Fly   530 LYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRK 594
            :::||||..|:|.::..|||:|::.|:|:.|.||.|.....|.|:.::...|..:..:|:..:..
Zfish   501 IFFRICWRYVSPFIITFILIFTVIQYKPITYNDYVYPGWSLVIGFAMALSSVICIPIYALFKIAM 565

  Fly   595 QPSHLGLWARIRKAFEPLPNWGPS 618
            ......| .|::.:.:|.|:|||:
Zfish   566 SEGSTFL-ERLKNSVKPDPDWGPA 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 194/498 (39%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 218/596 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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