DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and Slc6a16

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001311464.1 Gene:Slc6a16 / 381884 MGIID:2685930 Length:742 Species:Mus musculus


Alignment Length:606 Identity:137/606 - (22%)
Similarity:250/606 - (41%) Gaps:116/606 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPF 102
            |||.....:|..|....||                 |..|.:.:|::::.::..:....|.||..
Mouse   106 ESSELVNRMSRESSEGYPP-----------------RQLWASKVEYMLAIMSYLLMPSGVLRFAS 153

  Fly   103 TALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVY-DFSPIMRGIGYGQVLATGIV 166
            ..:..|..:|.|.|:::|:.:|.|:.:|||.:||.:.:.|..:: :.||...|:||..|:...|.
Mouse   154 GWVHKGSCSFFIAYILMLLGIGIPLLFLEMAVGQRAQQSSADMWKNLSPWFGGVGYSMVMVCFIT 218

  Fly   167 TTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTECLDSGPQEASRATSLAGSGVRTTSAEFYFT 231
            .||.....:..|.|....||..:||..|..:..:...|...::|             ||..:::.
Mouse   219 NTYLNVFNSWILFYMSHIFYFVVPWDQCPLQRNSSNFDPECEQA-------------TSYTYFWY 270

  Fly   232 NIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRA 296
            ...|:....|:|| |.||:||.::|.:::.:|...:..|:||.||..:.|.|.||.:::..|:|.
Mouse   271 RKTLKASDRIEDG-GQPSFSLGMSLFLSFCLICAFLVNGIKSIGKVLFVLLLVPYSIIVCFLIRT 334

  Fly   297 LTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIV 361
            |::.||..|:.:.|..:...:.:..:|..|..||.|.:.:.||.|:..||:....:|...||.::
Mouse   335 LSMDGAEYGLKHLLILKVASISDLTIWCHAGIQVLFDIGLGFGPIVSLASHVPDFNNCMADAFLM 399

  Fly   362 TTLDTFTSLLSGVIIFGILG--------NLAYENNTTDIASVVNG-------------------- 398
            ......|.|::...:..|||        :...:|..|.:..|..|                    
Mouse   400 ALFKIITLLMTTPFLLSILGFWATTTTHHCCKKNQETLLRLVAQGILPPDAQPPDLSGNPTSNYN 464

  Fly   399 --------------------------------GPGLAFISYPDAIAKFK----WLPQLFSVLFFL 427
                                            .|...|:.:.:.|:...    |:     |||||
Mouse   465 SWLSSLPPPLRSAVLSVVPECSVQKQFLKIKDNPRFLFLIFTEVISLLPGSGFWI-----VLFFL 524

  Fly   428 MLFVLGIGSNVGMASCMSTVIKDQFGHLKNW--TVVVGIAIVGYFLGLLYITPGGQFLLNLVDYF 490
            :|..||:.||:.........::|.|...:..  .::|.:::..:..||::|.|.|.:..:|:...
Mouse   525 LLLTLGLCSNLMFMLGNVLTLQDTFPFCRRQPRLLIVCVSMAMFLCGLIFIQPSGIYYFSLLSEC 589

  Fly   491 GVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTIL--IYTLV 553
            .|....:::.|.|.:.:||.||..|...|:..::|..........|..::|:::|.:|  ::..:
Mouse   590 WVAVPVIIIIICENLAVAWAYGADRFLADMVALLGRPIFSGCGWLWCYISPMVVLGLLTSVFVYL 654

  Fly   554 LYEPLKYKDYTYQSGVYVFGW 574
            :..||.|           |.|
Mouse   655 VKGPLVY-----------FAW 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 124/545 (23%)
Slc6a16NP_001311464.1 SLC5-6-like_sbd 125..694 CDD:294310 130/570 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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