DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and CG43066

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster


Alignment Length:581 Identity:178/581 - (30%)
Similarity:287/581 - (49%) Gaps:102/581 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 APPPGH----------GDSPSGV----EAGQ---------PGK--KRDSWNNDIEFLMSCIALSV 92
            ||..||          ||...||    .|.|         ||.  :|.:|:..::|.:|.|..||
  Fly     9 APRNGHEMAPLNTRARGDGTHGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSV 73

  Fly    93 GLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYD-FSPIMRGIG 156
            ||||:||||:...:||||||:||::::|||.|.|::.:|:.:||....|::.|:: ..|.:.|||
  Fly    74 GLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIG 138

  Fly   157 YGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTECLDSGPQEASRATSLAGSG- 220
            ....:.|..|..||..::.....|..:||...||||.|                    .|.|:| 
  Fly   139 ISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC--------------------PLNGTGF 183

  Fly   221 -----VRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYF 280
                 .:::...:::....|....|:|:..|. .|.:.|.|.::|.::..|:.||::||||..||
  Fly   184 ELEECAKSSETTYFWYRTTLDAAPSMDEPGGL-KWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYF 247

  Fly   281 LALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYA 345
            .:||||:|:.:..:|.:||.||..|:::...|:..|||||.||..|.||||:|..:.||::|.:.
  Fly   248 TSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFG 312

  Fly   346 SYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYEN------NTTDI------------ 392
            |||...:|..||..:|:..:..|::.:.|:||.|||..|..|      :.|:|            
  Fly   313 SYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDT 377

  Fly   393 ------ASVVNG----------------------GPGLAFISYPDAIAKFKWLPQLFSVLFFLML 429
                  .|::||                      |.|||||.:..||.:....| .::||||.||
  Fly   378 QGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAP-FWAVLFFTML 441

  Fly   430 FVLGIGSNVGMASCMSTVI--KDQFGHLKNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGV 492
            ..||:||.:|:...|...:  .|....:|...|...:.:..:.:|.::.|..|::.|.:.|.|..
  Fly   442 LSLGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAG 506

  Fly   493 TFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLV 553
            |...:|:|:.|::.:.:|||.:|...|:..|.|.:...|::..|..:.|::|:.||:.::|
  Fly   507 TIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVV 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 164/531 (31%)
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 166/535 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440727
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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