DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and CG8850

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster


Alignment Length:640 Identity:346/640 - (54%)
Similarity:453/640 - (70%) Gaps:39/640 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KPNESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGK--------------KRDSWNNDIEFLM 85
            |...:..|.:...||.     ||..|..|.|.....|:              :||.|:..:|||.
  Fly     9 KLRRNMQGAQGSREGH-----PGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVEFLF 68

  Fly    86 SCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDFSP 150
            |||||||||||||||||.|||||||||:|||:|||:|:|:||||||:::|||||||.::.:|.:|
  Fly    69 SCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAP 133

  Fly   151 IMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTECLDSGPQEASRATS 215
            |||||.||||.:|.:.|||||.:||||:||.|.||...|||:||..|||..|:.:|...|:.::.
  Fly   134 IMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAANDSSI 198

  Fly   216 LAGSGVRTTSAEFYFTNIILREKASIDD-GIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASY 279
            :.|    .:|||.:||..:|||..|:|| |:|.|||.|.|.|...|::|..|:.||::|||||||
  Fly   199 VQG----VSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASY 259

  Fly   280 FLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMY 344
            ||||||||:|:|||:||:|||||:.|::|||:|||.:||.|.|||||:||:|||||||||.::||
  Fly   260 FLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMY 324

  Fly   345 ASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLAFISYPD 409
            ||:|.|..|:::|..|:||:|:.||:|:|.||||||||||:|.||.||:.||.||.||||||||:
  Fly   325 ASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPE 389

  Fly   410 AIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHLKNWTVVVGIAIVGYFLGLL 474
            ||||||:|||||:||||.||.|||||||:||||.:..|:||:|.||.:|.:.|..:|:|:..||:
  Fly   390 AIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLPHWLLAVSASIIGFLCGLV 454

  Fly   475 YITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVV 539
            |:||||||:|||||::|.||:||||||.||:.:.|||||||:|.|:|||:.:|||.|:|||||:|
  Fly   455 YMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIV 519

  Fly   540 TPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQP-----SHL 599
            .|.||..:|:|.|..||||.|:...|....|:.||.:...||.|:.|||:..:.:||     |..
  Fly   520 APGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKF 584

  Fly   600 GLWARIRKAFEPLPNWGPSDPQTLKRYQLFVQEGNANALFRRSSIWHKIYDNIFG 654
            ||      |.:|..||||...|   :::.::......|.| :|.....::|||||
  Fly   585 GL------AMQPTANWGPLQTQ---KFEAYIIHRKREADF-KSPRGGYLFDNIFG 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 299/477 (63%)
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 299/477 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469628
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D14202at7147
OrthoFinder 1 1.000 - - FOG0008552
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.