DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a19b

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:611 Identity:186/611 - (30%)
Similarity:307/611 - (50%) Gaps:101/611 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYL 130
            |||.    |..|:|..:::::|:...||||||||||:....:|||||:||:||:|:..|.|:.:|
Zfish    29 EAGD----RPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLHL 89

  Fly   131 EMLLGQFSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYC 194
            |..:||...:|||.|: ..:|.|.|:|...:..:.:|:.||.|::|..:.||.:||...||||.|
Zfish    90 EFAIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWSQC 154

  Fly   195 REEWGTECLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVA 259
                        |...:|...:...| :::..::::....|...|:|||..|...| :.|.|..|
Zfish   155 ------------PINENRTGPIPECG-KSSPVDYFWYRETLNTSAAIDDTGGLQVW-MVLCLISA 205

  Fly   260 WIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWY 324
            |.|:.....:|::::|||.|..:..||:|:.:.|:|.|||.|:.||:.:...|..::|..|..|.
Zfish   206 WAVLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGIKFLFTPDINELANPSTWL 270

  Fly   325 AAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYE--- 386
            .|..|||:|.::.||.:|.::|||...:|..:||.|::.::.|||:.:..:|:.|:|..|.|   
Zfish   271 DAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIGFRATERFD 335

  Fly   387 -----------------------NNTTDIASVVNG-------------------------GPGLA 403
                                   :|..|:...:|.                         |.|||
Zfish   336 DCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTCDLNNFLSEGVEGTGLA 400

  Fly   404 FISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHLKNW--TVVVGI-A 465
            ||.:.:||.|....| |:|||||:|||.||:.|..|....:...::|.....|:|  .::.|: .
Zfish   401 FIVFTEAITKMPLSP-LWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGVFPKSWPKEIISGVTC 464

  Fly   466 IVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSL 530
            :|...:||:::...|.:.|.|.|.|..:...|::|..|::.:.::||:.|...|:.||||.|.::
Zfish   465 LVCCLVGLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIFMIGHKPNI 529

  Fly   531 YYRICWAVVTPLLMLTILIY---TLVLYEPLKYKDY-------------TYQSGVYVFGWCLSAF 579
            :::..|..::||:||.|.::   |.|..| :.|..:             .|.:.:||..:.|:  
Zfish   530 FWQATWRFISPLIMLAIFVFYFSTTVTKE-IFYSAWDPESENFPTLEKKPYPTWIYVIIFLLA-- 591

  Fly   580 GV------GQVLFWAIP--AVRKQPS 597
            ||      |..:|.||.  ..:|.||
Zfish   592 GVPSLAVPGTAVFRAIRDYCCKKHPS 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 165/534 (31%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 180/597 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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