DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and Slc6a15

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_758824.1 Gene:Slc6a15 / 282712 RGDID:628664 Length:729 Species:Rattus norvegicus


Alignment Length:565 Identity:178/565 - (31%)
Similarity:297/565 - (52%) Gaps:95/565 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVG 124
            |:..|.|...   :|.:||:.::::::.:..|||||||||||:...:|||||:::||||:|:::|
  Rat    50 DAEDGSEVDD---ERPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLLVIG 111

  Fly   125 KPVYYLEMLLGQFSSRGSVKVYDF-SPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPT 188
            .|:::||:.:||...|||:.|::: ||.:.|||:...:....|..||..::..||.||..||...
  Rat   112 IPLFFLELSVGQRIRRGSIGVWNYISPKLGGIGFASCVVCYFVALYYNVIIGWTLFYFSQSFQQP 176

  Fly   189 LPWSYC---REEWGT----ECLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIG 246
            |||..|   :....|    ||      |.|.||:            :|:....|...:||.:..|
  Rat   177 LPWDQCPLVKNASHTYIEPEC------EKSSATT------------YYWYREALAISSSISESGG 223

  Fly   247 YPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLR 311
            . :|.:...|..||:::...|.||::||||..||.:||||||::..|:|:|.|.|:.||:.:...
  Rat   224 L-NWKMTGCLLAAWVMVCLAMIKGIQSSGKIMYFSSLFPYVVLICFLIRSLLLNGSIDGIRHMFT 287

  Fly   312 PQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVII 376
            |:...:|||:||..|.|||||:|.:.||.:|.::|||:..:|.:.||.:|:.::.|||:|:.:::
  Rat   288 PKLEMMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVV 352

  Fly   377 FGILG---NLAYE-----------------NNTTDI------ASVVNG----------------- 398
            |.:||   |:..|                 |.:.|:      .|.|..                 
  Rat   353 FAVLGFKANIVNEKCISQNSEMILKLLKTGNVSWDVIPRHINLSAVTAEDYHVVYDIIQKVKEEE 417

  Fly   399 --------------------GPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASC 443
                                |.|||||::.:|:..|...| .:||:|||||..||:||..|....
  Rat   418 FAVLHLKACQIEDELNKAVQGTGLAFIAFTEAMTHFPASP-FWSVMFFLMLINLGLGSMFGTIEG 481

  Fly   444 MSTVIKDQFGHLKNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIA 508
            :.|.:.|.|...|....|: ..::.:.:||:::...|.:.:.:.|.:..|...|::.|.|.:.::
  Rat   482 IITPVVDTFKVRKEILTVI-CCLLAFCIGLMFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVS 545

  Fly   509 WIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLV 553
            ::||:.:...|:..|:|...|.||...|..::||:::|:||.::|
  Rat   546 FVYGIDKFLEDLTDMLGFAPSKYYYYMWKYISPLMLVTLLIASIV 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 173/547 (32%)
Slc6a15NP_758824.1 SLC6sbd_SBAT1 61..640 CDD:212091 175/551 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.