DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a20b

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:629 Identity:187/629 - (29%)
Similarity:303/629 - (48%) Gaps:111/629 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SLNASTISIPGAYKPNESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPG---KKRDSWNNDIEF 83
            |.:|..:|:|          ..:.|....|:..|..|...|...|...||   |.|..|:|.::|
Mouse     3 SPSAHAVSLP----------EDEELQPWGGAGGPGQHPGRPRSTECAHPGVVEKVRPKWDNPLQF 57

  Fly    84 LMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVY-D 147
            |:.||:.:||||||||||:.....|||:|::||:|:||:.|.|:.|||:.:||...:||:..: .
Mouse    58 LLVCISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRMRQGSIGAWRT 122

  Fly   148 FSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYC-----REEWGTECLDSGP 207
            .||.:.|:|...::.:.:.:.|:..:....|.|...||...||||.|     ...:..||     
Mouse   123 ISPYLSGVGIASLVVSFLASVYFNVINTWALWYLFHSFQDPLPWSVCPLNSNHTGYDEEC----- 182

  Fly   208 QEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVK 272
            ::||             |.::::....|....||.:. |...|..||.|.:||:::...:.:|.:
Mouse   183 EKAS-------------STQYFWYRKTLNISPSIQEN-GGVQWEPALCLTLAWLMVYLCILRGTE 233

  Fly   273 SSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAIC 337
            |:||..||....||.|:::.|||.|||.||.:|:.|...|:..:|..|:.|..|.||:||||.:.
Mouse   234 STGKVVYFTTSLPYFVLIIYLVRGLTLHGATNGLAYMFTPKIEQLANPKAWINAATQIFFSLGLG 298

  Fly   338 FGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLA---YEN----------NT 389
            .|.:|.:||||...::..:.|.||:.:::.|::.|.::.|.|.|..|   |||          |:
Mouse   299 CGGLIAFASYNEPSNDCQKHALIVSVINSTTAIFSSIVTFSIYGFKATFNYENCLNKVILLLTNS 363

  Fly   390 TDI----ASVVN------------------------------------GGPGLAFISYPDAIAKF 414
            .|:    .:|.|                                    .|.|||||.|.:||...
Mouse   364 FDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHIRNCSLESELDTAVQGTGLAFIVYTEAIKNM 428

  Fly   415 KWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQ---FGHLKNWTVVVGIAIVGYFLGLLYI 476
            : :.||:|||:|.||..||:||.||..:.:.|.:.|.   ..:|....:...:.::...:|:::.
Mouse   429 E-VSQLWSVLYFFMLLTLGMGSMVGTGTAILTPLTDSKIISSYLPKEAISGLVCLLNCAIGMVFT 492

  Fly   477 TPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTP 541
            ...|.:..:|.:.:..|...|::.:.|.:.:.::||:||...|:..|.|...|.|:::.||.|:|
Mouse   493 MEAGNYWFDLFNDYTATLSLLLIVLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKVMWAFVSP 557

  Fly   542 LLMLTILIYTL---VLYEPLKY------------KDY-TYQSGV 569
            ||::.:.|:.|   :|...|:|            ||| ||...|
Mouse   558 LLIVGLFIFYLSDYILTGTLQYQAWDATQGHVVTKDYPTYALAV 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 163/538 (30%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 9/44 (20%)
SLC5-6-like_sbd 45..620 CDD:294310 175/577 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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