DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and snf-9

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:627 Identity:194/627 - (30%)
Similarity:308/627 - (49%) Gaps:94/627 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PNESSNGK-----KTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLG 95
            |::||..:     .|:...|||:         ..:|..|....|.:|.|.||||:|.:.::||||
 Worm    17 PSDSSAAEDQRIATTIVRDSGSS---------KEIEESQADPCRGAWGNQIEFLLSTLGMAVGLG 72

  Fly    96 NVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVY-DFSPIMRGIGYGQ 159
            |:||||..|..|||.||::||:...:|.|.|..|||.||||:....:..:: .|:||::|:|:..
 Worm    73 NIWRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVGWMA 137

  Fly   160 VLATGIVTTYYATLMALTLRYFVDSFY-PTLPWSYCREEWGT--ECLDSGPQEASRATSLAGSGV 221
            |..:.:|..||..::..:..|...... .|..|:.|...|..  .|:|||.|....:.:..|:..
 Worm   138 VAVSSLVAIYYIIIIGWSTVYMASIVMGHTSKWNRCGNSWNNAESCVDSGLQPLCASFNATGNET 202

  Fly   222 RTTSA--------EFY-FTNIILREKASID----------------------DG------IGYPS 249
            ....|        :|| :.|....:|..::                      ||      |.:.|
 Worm   203 SPVWANLSSEGRGKFYIYLNTSCYDKVDLEFNKTKMIAATEQYFFDYVVKPTDGFLEFSSINFKS 267

  Fly   250 WSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFL-RPQ 313
            :   ..:...|:::..|::|||...|||||.:...||.::::|..|.:||.||.||:.|:| .|.
 Worm   268 F---FGMNACWLIVVLILWKGVGYMGKASYVIVTLPYFIIILLFFRGITLDGAEDGIYYYLGNPD 329

  Fly   314 WHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFG 378
            |.|:..|..|..|:.|:.|||.|.:|.:|..||:::..:|.:|||.||...||..||:.|..:|.
 Worm   330 WSKVFMPATWGEALKQLCFSLGIGYGGLIGMASFSKPNNNCFRDALIVIIGDTMMSLVGGAAVFS 394

  Fly   379 ILGNLAYENNTTDIASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASC 443
            .||.||.:...: :|.|||.|..|||:::|:|:.:.. ||:|:|.|||||||.|||.:.|...:.
 Worm   395 TLGFLAKKKGCS-VAEVVNDGFSLAFVAFPEALGRMP-LPELWSFLFFLMLFFLGISTEVAYVNV 457

  Fly   444 MSTVIKDQFGHL--KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYF--GVTFVALVLAIFEL 504
            ..:.|.|||.:|  :.|.|.|...:|.|.||::.:|.||.:...:.|.:  ||:....|.|  |:
 Worm   458 FCSSICDQFVNLRKRKWLVAVLWCLVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAVTA--EV 520

  Fly   505 VTIAWIYGVKRLCRDVEFMIGI----------KTSLYYRICWAVVTPLLMLTILIYTLVLYEPLK 559
            :.:|::||.:....|::.|.|.          :.|.|:...|..|||:|...:::...:      
 Worm   521 LIVAYVYGRRNQLADMKEMFGESKNKCTSWIGQHSPYFGFNWMFVTPVLGSILIVLASI------ 579

  Fly   560 YKDYTYQS-----GVY-----VFGWCLSAFGVGQVLFWAIPA 591
             :.|.||:     .:|     :.||.:....:..|..:|..|
 Worm   580 -RQYPYQTDENKPNMYPLAFDIVGWAVCLLPMALVPIFAFCA 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 175/532 (33%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 175/531 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28590
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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