DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and snf-7

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_499702.2 Gene:snf-7 / 176723 WormBaseID:WBGene00004906 Length:705 Species:Caenorhabditis elegans


Alignment Length:659 Identity:188/659 - (28%)
Similarity:293/659 - (44%) Gaps:114/659 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AYVGSLNASTI--SIPGAYKPNESSNGKKTLSEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNND 80
            |...:|..:|.  |.|....|...:...||.:...|...|.   ..|:.|:.|     |.::.|.
 Worm     2 AQSNALTTTTTGSSAPSVIPPTAPTASVKTKAPTKGPVQPQ---KKPTTVDNG-----RRAYRNQ 58

  Fly    81 -------------IEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEM 132
                         ||..:|.:..:|||||:||||.||.:|||.:|:|.|::..||...|..::|.
 Worm    59 VVVENVDRQAFRGIESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVVCGILFAVPAIHMEF 123

  Fly   133 LLGQFSSRGSVKVY-DFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCRE 196
            .|||::::.....: ...||:.|:|:...|...|:..||..:::..:.|..:..|.| ..|.|..
 Worm   124 ALGQYAAKSPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWIVLYLFNIIYAT-KISKCNN 187

  Fly   197 EW----GTECLDSGPQEASRATSLAGSGVRT----------------------------TSAEFY 229
            :|    .|.|.:...|:......|..|.|.|                            ...|.:
 Worm   188 DWNKNRSTICYEGVKQKLCSGYMLNSSLVMTNLTRNASVHSKMMYIDGKCQNATNMKLAVGTEQF 252

  Fly   230 FTNIILREKASIDD--GIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVL 292
            |||.:::......|  .|..|   :..|:||.|::....:.:|:|:.||.||:..|.||.:::.|
 Worm   253 FTNFVVKPSTGFTDFNSINVP---MLAAVAVCWVIAIISLIRGMKAIGKLSYYTVLLPYAIIIAL 314

  Fly   293 LVRALTLPGAFDGVLYFLRPQWHK-----------LLEPQVWYAAVTQVFFSLAICFGNIIMYAS 346
            ::|.|||.||..| |:||  .|.|           |.:|.||.||:.|:.|||:|..|.::...|
 Worm   315 MIRGLTLEGASTG-LHFL--FWGKPNEYGHYDFAGLYDPDVWIAALMQMCFSLSIGQGGLMNIGS 376

  Fly   347 YNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTT-----DIASVVNGGPGLAFIS 406
            ||:..:|.||||.:|...||..|||.|..:|..||.||.:.|.:     ....||..|..||||.
 Worm   377 YNKKTYNWYRDAYLVVLCDTLMSLLGGTAVFSTLGFLAEQRNISISNPKGFNEVVQEGHALAFIV 441

  Fly   407 YPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHLK--NWTVVVGIAIVGY 469
            |.:|||:..: |.|:..|||:|||:|||.:.:.:...:.:.:.|:|.:|:  .|..||.::...:
 Worm   442 YTEAIAQMPY-PFLWYALFFVMLFLLGISTEIVIIETVCSCLADRFHYLRQHRWITVVTVSTTFF 505

  Fly   470 FLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFM----------- 523
            .|||:..:..|.:..:|.|.:.....|.:......:|:.|.||:.....|:..|           
 Worm   506 LLGLVMTSDAGFYWFDLYDEYSAGVSATIGTAIMCLTVCWCYGLDNFRADIREMWEEPESRLDKY 570

  Fly   524 IGIKTSLYYRICWAVVTPLLMLTILI-------YTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGV 581
            :| ..:..:.|.|..|||:..|.|:.       |      |.|.....|......|||.::|   
 Worm   571 LG-PGAYVWTIVWRFVTPICCLVIMFAWIWDKKY------PFKGDSKKYPPVFDAFGWFVAA--- 625

  Fly   582 GQVLFWAIP 590
              :.|:.:|
 Worm   626 --LPFFVVP 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 165/560 (29%)
snf-7NP_499702.2 SLC6sbd 70..598 CDD:271359 163/536 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28590
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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