DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a13

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:579 Identity:207/579 - (35%)
Similarity:319/579 - (55%) Gaps:42/579 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQF 137
            :|:.|.|.:||::|.....:|||||||||:...:||||||.|||||.|...|.||::||..|||:
  Rat    31 EREQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQY 95

  Fly   138 SSRGSV-------KVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCR 195
            :::|.:       .:::.|....||||...:...::..||..::|..|.|...||...|||..|.
  Rat    96 TNQGGITAWRKICPIFEASVPSPGIGYASQMIVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSCS 160

  Fly   196 EEWGTE-CLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGI---GYPSWSLALAL 256
            .||.|| |::.  |:.:.:.::......:...||:...::     .|.|||   |...|.|.|.|
  Rat   161 HEWNTENCVEF--QKTNNSLNVTSENATSPVIEFWERRVL-----KISDGIQHLGSLRWELVLCL 218

  Fly   257 AVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQ 321
            .:|||:....::|||||:||..||.|.|||::::|||:|.:|||||..|:.::|.|...:|.:||
  Rat   219 LLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAQGIQFYLYPNITRLWDPQ 283

  Fly   322 VWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYE 386
            ||..|.||:|||.|||.|.:....|||::.:|.|||...:..|::.||.::|..||.|||.::.|
  Rat   284 VWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCVALCILNSSTSFVAGFAIFSILGFMSQE 348

  Fly   387 NNTTDIASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQ 451
            .. ..|:.|...|||||||:||.|:....:.| |::..||.|:.:||:.|.......:.|.:.|.
  Rat   349 QG-VPISEVAESGPGLAFIAYPRAVVMLPFSP-LWACCFFFMVVLLGLDSQFVCVESLVTALVDM 411

  Fly   452 FGHL-----KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAWI 510
            :..:     :...:::.:::|.:|:||:.:|.||.::..|.||:..:.:.|: :||||.:.:||:
  Rat   412 YPRVFRKKNRREILILIVSVVSFFIGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWV 476

  Fly   511 YGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKY-KDYTYQSGVYVFGW 574
            ||..|...::|.|||.|.....:.||...||.:.|...:::|:.|.||.| |.|||.......||
  Rat   477 YGASRFYDNIEDMIGYKPWPLIKYCWLFFTPAVCLATFLFSLIKYTPLTYNKKYTYPWWGDALGW 541

  Fly   575 CLSAFGVGQVLFWAIPAVR--KQPSHLGLWARIRKAF---EPLPN------WGPSDPQT 622
            .|:...:..:..|:|..:|  |.|    |..|:|:..   |.||.      ..|:.|.|
  Rat   542 LLALSSMVCIPAWSIYKLRTLKGP----LRERLRQLVCPAEDLPQKSQPELTSPATPMT 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 180/493 (37%)
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:382020 202/561 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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