DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a5

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_976079.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:799 Species:Rattus norvegicus


Alignment Length:666 Identity:235/666 - (35%)
Similarity:358/666 - (53%) Gaps:87/666 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GSLNASTISIPGAYKPNESSN---GKKTLSEGSGSAPPPGHGDS----------------PSGV- 65
            |:.||....||....|.|..|   .|.||..  .:.||.|..:.                |..| 
  Rat   115 GAGNALHCKIPALRGPEEDENVSVAKGTLEH--NNTPPVGWVNMSQSTVVLGTDGIASVLPGSVA 177

  Fly    66 -------EAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILV 123
                   |.|...|.|.:|::.::|::|.:..:||||||||||:.|.:||||||:||||::|.|.
  Rat   178 TTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALA 242

  Fly   124 GKPVYYLEMLLGQFSSRGSVKVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPT 188
            |.|:::||:.||||:|:|.|.|:...|.::|.|...::.:.::..||..::..||.|...||...
  Rat   243 GLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASFVSV 307

  Fly   189 LPWSYCREEWGT-EC-------LDS---GPQE----------------------ASRATSLAGSG 220
            |||..|...|.| ||       |||   |...                      .|:|.....||
  Rat   308 LPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQANKTFVSG 372

  Fly   221 VRTTSAEFYFTNIILREKASIDDGIGYPS---WSLALALAVAWIVIAGIMFKGVKSSGKASYFLA 282
                 :|.||...:|:    |..||.||.   |.|...|.:||:::...:.||:|:|||..||.|
  Rat   373 -----SEEYFKYFVLK----ISAGIEYPGEIRWPLPFCLFLAWVIVYASLAKGIKTSGKVVYFTA 428

  Fly   283 LFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASY 347
            .|||||:::||:|.:|||||..|:.||:.|:|.||.:..||..|.||:||||:..:|.:|..:||
  Rat   429 TFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAAWGGLITLSSY 493

  Fly   348 NRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLAFISYPDAIA 412
            |:|.:|.|||..|||..::.||:.:|.:||.::|.:|.|.. .:|.:|.:.|||:||:.||:|:.
  Rat   494 NKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERK-VNIENVADQGPGIAFVVYPEALT 557

  Fly   413 KFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQF-GHLKNWTVV--VGIAIVGYFLGLL 474
            :....| .::::|||||..||:.:.......:.|.|.|:| .:|:....|  :|..|..:.:|..
  Rat   558 RLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCICFFIMGFP 621

  Fly   475 YITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVV 539
            .||.||.::..|||.:..::..:::||||||.|:::||::|.|.|:|.|||.:.::::::|||.|
  Rat   622 MITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKVCWAFV 686

  Fly   540 TPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHLG---L 601
            ||.::..||.::...:||:.|..|.|.:...|.||.:.|..|    .| ||.:.....:|.   .
  Rat   687 TPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSV----IW-IPIMFVIKMYLAPGRF 746

  Fly   602 WARIRKAFEPLPNWGP 617
            ..|::....|.|:|||
  Rat   747 IERLKLVCSPQPDWGP 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 195/515 (38%)
Slc6a5NP_976079.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
SLC6sbd_GlyT2 193..789 CDD:271389 216/586 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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