DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and Slc6a5

DIOPT Version :10

Sequence 1:NP_610517.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_063131123.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:812 Species:Rattus norvegicus


Alignment Length:674 Identity:235/674 - (34%)
Similarity:360/674 - (53%) Gaps:103/674 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GSLNASTISIPGAYKPNESSN---GKKTLSEGSGSAPPPGHGDSPS----------------GV- 65
            |:.||....||....|.|..|   ||.||.          |.::|:                |: 
  Rat   128 GAGNALHCKIPALRGPEEDENVSVGKGTLE----------HNNTPAVGWVNMSQSTVVLGTDGIA 182

  Fly    66 ---------------EAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIP 115
                           |.|...|.|.:|::.::|::|.:..:||||||||||:.|.:||||||:||
  Rat   183 SVLPGSVATTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIP 247

  Fly   116 YLIVLILVGKPVYYLEMLLGQFSSRGSVKVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRY 180
            ||::|.|.|.|:::||:.||||:|:|.|.|:...|.::|.|...::.:.::..||..::..||.|
  Rat   248 YLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFY 312

  Fly   181 FVDSFYPTLPWSYCREEWGT-EC-------LDS---GPQE----------------------ASR 212
            ...||...|||..|...|.| ||       |||   |...                      .|:
  Rat   313 LFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQ 377

  Fly   213 ATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPS---WSLALALAVAWIVIAGIMFKGVKSS 274
            |.....||     :|.||...:|:    |..||.||.   |.||..|.:||:::...:.||:|:|
  Rat   378 ANKTFVSG-----SEEYFKYFVLK----ISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIKTS 433

  Fly   275 GKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFG 339
            ||..||.|.|||||:::||:|.:|||||..|:.||:.|:|.||.:..||..|.||:||||:..:|
  Rat   434 GKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAAWG 498

  Fly   340 NIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLAF 404
            .:|..:|||:|.:|.|||..|||..::.||:.:|.:||.::|.:|.|.. .:|.:|.:.|||:||
  Rat   499 GLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERK-VNIENVADQGPGIAF 562

  Fly   405 ISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQF-GHLKNWTVV--VGIAI 466
            :.||:|:.:....| .::::|||||..||:.:.......:.|.|.|:| .:|:....|  :|..|
  Rat   563 VVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCI 626

  Fly   467 VGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLY 531
            ..:.:|...||.||.::..|||.:..::..:::||||||.|:::||::|.|.|:|.|||.:.:::
  Rat   627 CFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIF 691

  Fly   532 YRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQP 596
            :::|||.|||.::..||.::...:||:.|..|.|.:...|.||.:.|..|    .| ||.:....
  Rat   692 WKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSV----IW-IPIMFVIK 751

  Fly   597 SHLG---LWARIRKAFEPLPNWGP 617
            .:|.   ...|::....|.|:|||
  Rat   752 MYLAPGRFIERLKLVCSPQPDWGP 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_610517.1 SLC6sbd 75..552 CDD:271359 196/515 (38%)
Slc6a5XP_063131123.1 None

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