DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and slc6a6

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:595 Identity:218/595 - (36%)
Similarity:329/595 - (55%) Gaps:35/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PPPGH--GDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPY 116
            |.||.  |..|.....|:| .:|:.|.:.|:|::|.....:|||||||||:...:||||||:|||
 Frog    20 PSPGKSPGTRPEDEADGKP-PQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPY 83

  Fly   117 LIVLILVGKPVYYLEMLLGQFSSRGSVKVYD-FSPIMRGIGYGQVLATGIVTTYYATLMALTLRY 180
            .|.|...|.||::||::||||:|.|.:..:: ..|:..||||..::...::..||..::|..:.|
 Frog    84 FIFLFGGGLPVFFLEVVLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYY 148

  Fly   181 FVDSFYPTLPWSYCREEWGTE-CL-DSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDD 243
            ...||...|||:.|.:.|.|| |: |:..:..:...|:..:...:...||:...::...| .|||
 Frog   149 LFQSFQGQLPWALCHQPWNTESCVEDTFRKNWTMWMSMNSTNFTSPVTEFWEHKVLSLSK-GIDD 212

  Fly   244 GIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLY 308
             :|...|.|||.|.:.|::....::|||:|:||..||.|.||::::||||:|.:|||||.:|:.:
 Frog   213 -VGVLKWDLALCLLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIKF 276

  Fly   309 FLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSG 373
            :|.|...:|.:||||..|.||:|||.|||.|.:....|||::.:|.|||..::..|::.||.:||
 Frog   277 YLYPDITRLADPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSG 341

  Fly   374 VIIFGILGNLAYENNTTDIASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNV 438
            ..||.:||.:|.|.. .|||.|...|||||||:||.|::... ||..:::|||:||.:||:.|..
 Frog   342 FAIFSVLGFMAQEQG-VDIADVAESGPGLAFIAYPKAVSMMP-LPSFWAILFFIMLLLLGLDSQF 404

  Fly   439 GMASCMSTVIKDQF------GHLKNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVAL 497
            .......|.:.|.:      |:.:...:.| :..:.|.|||..:|.||.::..|.||:..:.|.|
 Frog   405 VEVEGQITSLVDLYPSFLRKGYRREIFIAV-VCFLSYLLGLTMVTEGGMYVFQLFDYYAASGVCL 468

  Fly   498 V-LAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKY- 560
            : :|.||.|.:||:||..:...::|.|||.|...:.:..|.|:||||.:...|::|..|.||.| 
 Frog   469 LWVAFFECVAVAWVYGADKFYDNIEDMIGYKPGPWMKWSWTVITPLLCVACFIFSLAKYTPLTYN 533

  Fly   561 KDYTYQSGVYVFGW--------CLSAFGVGQV------LFWAIPAVRKQPSHLGLWARIRKAFEP 611
            |.|.|.......||        |:....|..:      |...|.|| ..|..:..||:..:|..|
 Frog   534 KYYVYPDWAIGLGWVLALSSMICIPLVVVFHIVRSDGSLIERIKAV-TAPREVNRWAKDSEAAAP 597

  Fly   612 L-PNWGPSDP 620
            : .|.|...|
 Frog   598 ICTNGGFQKP 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 186/486 (38%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 203/546 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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