DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and slc6a12

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:554 Identity:214/554 - (38%)
Similarity:312/554 - (56%) Gaps:32/554 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KPNESSNGKKTL-SEGSGSAPPPGHGDSPSGVEAGQPGKKRDSWNNDIEFLMSCIALSVGLGNVW 98
            ||...:.|..|| :.|.|....|...|             |..|:|.:||::|.....:||||||
 Frog     8 KPRNGAGGSDTLCALGEGRHREPEIED-------------RGQWSNKVEFVLSVAGEIIGLGNVW 59

  Fly    99 RFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQFSSRGSVKVY-DFSPIMRGIGYGQVLA 162
            |||:...:||||||.|||||.|...|.||::||..|||::|:|.:..: ...|:..||||...:.
 Frog    60 RFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSQGGITAWRKICPLFEGIGYASQVI 124

  Fly   163 TGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGTE-CLD-SGPQEASRATSLAGSGVRTTS 225
            .|.:..||..::|..|.|...||...|||:.|...|.|| |:| .|..|  ..|||..|   |:|
 Frog   125 EGYLNIYYIVILAWALFYLFSSFTAELPWATCNNTWNTEHCIDFVGKSE--NFTSLENS---TSS 184

  Fly   226 AEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVML 290
            ...::...:|.....|:. :|...|.|||.|.:|||:....::|||||:||..||.|.||||:::
 Frog   185 VVEFWERRVLHLSEGIEH-LGNVRWDLALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYVMLI 248

  Fly   291 VLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIY 355
            :||||.:|||||::|::::|:|...:|.:||||..|.||:|||.|||.|.:....|||::.:|.|
 Frog   249 ILLVRGVTLPGAYEGIIFYLKPDMTRLQDPQVWMDAGTQIFFSYAICQGCLTALGSYNKYNNNCY 313

  Fly   356 RDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDIASVVNGGPGLAFISYPDAIAKFKWLPQL 420
            ||...:..|::.||.::|..||.:||.:|.|.. ..|:.|...|||||||:||.|:......| |
 Frog   314 RDCIALCFLNSITSFVAGFAIFSVLGFMAQEQG-VPISEVAESGPGLAFIAYPKAVTMMPVSP-L 376

  Fly   421 FSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHL-----KNWTVVVGIAIVGYFLGLLYITPGG 480
            :|.||||||..||:.|.......:.|.|.|.|.|:     :....::.:|::.|.|||:.:|.||
 Frog   377 WSCLFFLMLIFLGLDSQFVCVESLVTAIVDMFPHVFRKKYRREFFILAVAVICYLLGLILLTEGG 441

  Fly   481 QFLLNLVDYFGVTFVALV-LAIFELVTIAWIYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLM 544
            .::..|.||:..:...|: :||||::.:.::||..|...::|.|||.:.....:.||...||.:.
 Frog   442 MYVFQLFDYYAASGTCLLFVAIFEVICVGYVYGANRFYDNIEDMIGYRPWPLVKYCWLFATPAVC 506

  Fly   545 LTILIYTLVLYEPLKYKD-YTYQSGVYVFGWCLS 577
            |...:::|:.|.||||.: |.|.|..|..||.::
 Frog   507 LGTFLFSLIKYSPLKYNNRYVYPSWGYAIGWLMA 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 192/485 (40%)
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:382020 206/528 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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