DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1698 and slc6a1

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_002941943.4 Gene:slc6a1 / 100491859 XenbaseID:XB-GENE-5824076 Length:622 Species:Xenopus tropicalis


Alignment Length:536 Identity:188/536 - (35%)
Similarity:300/536 - (55%) Gaps:32/536 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQPGKKRD----SWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVY 128
            ||..||.|    :|....:||:||:..::|||||||||:...:||||||:|||.:.|:..|.|::
 Frog    61 GQKKKKADDDRGTWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLF 125

  Fly   129 YLEMLLGQFSSRGSVKVYDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSY 193
            :||..||||:|.|.:.|:..:|:.:|:|...|:.:..:..||..::|..|.|..:||..||||..
 Frog   126 FLETALGQFTSIGGLGVWKLAPMFKGVGMAAVVLSFWLNIYYIVIIAWALYYLFNSFSSTLPWQS 190

  Fly   194 CREEWGTE-CLDS-GPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPS---WSLA 253
            |...|.|| |..: ...:.|..||..        .||:..|:     ..:..|:|.|.   |.||
 Frog   191 CDNSWNTERCFSNYSLNDTSNLTSAV--------TEFWERNM-----HQMTGGLGEPGNIRWPLA 242

  Fly   254 LALAVAWIVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLL 318
            ..||:|||::...::|||:.:||..||.|.:||.::::|..|.:|||||.||:.:::.|.:.||.
 Frog   243 CTLALAWIMVYFSIWKGVEWTGKVVYFSATYPYFMLVILFFRGITLPGAMDGIRFYITPDFSKLS 307

  Fly   319 EPQVWYAAVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNL 383
            ..:||..|.||:|||..:..|::|...|||.|.:|||||:.||..:::.||:.:|.:||.|:|.:
 Frog   308 NSEVWMDAATQIFFSYGLGLGSLIALGSYNAFDNNIYRDSIIVCGINSTTSMFAGFVIFSIVGFM 372

  Fly   384 AYENNTTDIASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVI 448
            ::... ..|..:...||||||::||.|:.:....| ::|:|||.||.:||:.|.........|.:
 Frog   373 SHITK-KPIQELAASGPGLAFLAYPQAVTQLPMSP-VWSILFFSMLVMLGLDSQFCTVEGFITAL 435

  Fly   449 KDQFGHL---KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALV-LAIFELVTIAW 509
            .|::...   :....:..:..:.:.:|...||.||.::..|.||:..:.:.|: |..||.|:|:|
 Frog   436 VDEYPQCLRSRKKVFIAMVCFISFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETVSISW 500

  Fly   510 IYGVKRLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDYTYQSGVYVFGW 574
            .|||.|..:|:|.|||.:...::::|||..||.:.|.:..:::....||....|.|.:.....||
 Frog   501 CYGVDRFYQDIEEMIGYQPCSWWKLCWAYFTPCICLGVFCFSVFEMTPLTLGRYVYPAWGQGIGW 565

  Fly   575 CLS----AFGVGQVLF 586
            .::    .|..|.:|:
 Frog   566 LMALSSMVFIPGYMLY 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 175/489 (36%)
slc6a1XP_002941943.4 SLC5-6-like_sbd 62..611 CDD:382020 187/535 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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