DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and slc6a18

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001108369.1 Gene:slc6a18 / 100141332 ZFINID:ZDB-GENE-080219-9 Length:618 Species:Danio rerio


Alignment Length:633 Identity:199/633 - (31%)
Similarity:316/633 - (49%) Gaps:115/633 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQ 136
            ::|..|:|.:::|::|:..:|||||:||||:.....|||||:|||||.|:..|.|:.|||:.:||
Zfish    11 QERPKWDNKVQYLLTCVGFAVGLGNIWRFPYLCQIYGGGAFLIPYLIALVFEGLPLLYLELAIGQ 75

  Fly   137 FSSRGSVKV-YDFSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYC-----R 195
            ...:||:.| :..||::.|:|...::.:.:|..:|.|::|..|.||..||...||||.|     .
Zfish    76 SLRKGSIGVWHSISPLLGGVGVASMVVSFLVGLFYNTILAWVLWYFFHSFEDPLPWSQCPINDNL 140

  Fly   196 EEWGTECLDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAW 260
            |.:..||:.|.|                  ..:|:....|.....|:.. |...|:|.|.||.||
Zfish   141 EGYVEECVSSTP------------------VNYYWYRQTLNISPDIEQS-GSLQWTLVLCLATAW 186

  Fly   261 IVIAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYA 325
            .::.....:|:::.|||.|..|.|||:|:.:.||||||||||.||:.|...|.|..|..||||..
Zfish   187 SIVYICFIRGIETIGKAVYVTATFPYLVLTIFLVRALTLPGATDGLQYLFTPDWTLLTNPQVWLD 251

  Fly   326 AVTQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILG--------- 381
            |.||:||||::.||.:|.::|||...::..|||..|..:::.|||.:.:.||.|||         
Zfish   252 AATQIFFSLSLAFGGLIAFSSYNPKKNDCERDALFVGIINSATSLYASIPIFAILGFKATSNFNS 316

  Fly   382 ------------------NLAYEN----------NTTDIASVVN--------------GGPGLAF 404
                              |:..||          :..|..|.:|              .|.||||
Zfish   317 CVNSNILDLTNAFDIGDRNITIENYDSWLRDLNASDPDRVSSLNLKHCVLKNFLDQSASGTGLAF 381

  Fly   405 ISYPDAIAKFKWLP--QLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHL-KNW---TVVVG 463
            |.:.:|:.:   :|  |:::||||:|||.||:.|..|....:.|.:.|.  |: ..|   .:..|
Zfish   382 IVFTEAVIE---MPGSQVWAVLFFVMLFSLGLSSMFGNLEGVLTPLLDL--HMVPRWMPKEIFTG 441

  Fly   464 -IAIVGYFLGLLYITPGGQFLLNLVDYFGVTFVALVLAIFELVTIAWIYGVKRLCRDVEFMIGIK 527
             |.:|.:.:.|::....|.:.|.:.:.:..:...||:|.||::.:...||:||...|:|.|.|.:
Zfish   442 LICVVNFLVALIFTLGSGNYWLEIFNSYVGSVPLLVIAFFEIIAVVCFYGIKRFSDDIEQMTGRR 506

  Fly   528 TSLYYRICWAVVTPLLMLTILIYTLVLYEPLKYKDY-----TYQS---------GVYVFGWCLSA 578
            .:|::|.||..::|:::|.:|: ..|:.:..|:..|     .|::         ..:||..|:..
Zfish   507 PNLFWRCCWMGISPVMLLVVLV-AYVVVQVQKHPTYPAWNPQYENFPETEEKPYSTWVFSICVLL 570

  Fly   579 FGVGQVLFWAIPAVRKQPSHLGLWARIRKAFEPLPNWGPSDPQTLKRY 626
            ..|..:   :||.|       .|:..||:  ...|:.|..:|.|.:.|
Zfish   571 SSVPVI---SIPIV-------ALYRLIRR--HTHPHSGYPNPYTNQSY 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 179/540 (33%)
slc6a18NP_001108369.1 SLC5-6-like_sbd 12..587 CDD:294310 192/609 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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