DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1698 and si:ch211-132b12.3

DIOPT Version :9

Sequence 1:NP_001260835.1 Gene:CG1698 / 36006 FlyBaseID:FBgn0033443 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001076419.1 Gene:si:ch211-132b12.3 / 100002232 ZFINID:ZDB-GENE-050419-161 Length:577 Species:Danio rerio


Alignment Length:590 Identity:205/590 - (34%)
Similarity:322/590 - (54%) Gaps:38/590 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KKRDSWNNDIEFLMSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLILVGKPVYYLEMLLGQ 136
            ::|..|....|||::.....||:|||||||:....||||.|:||||:.::..|.|::.||.::||
Zfish     9 EERGFWGRKAEFLLAVAGNVVGVGNVWRFPYLCYRNGGGVFLIPYLVFVMTCGVPLFLLETVMGQ 73

  Fly   137 FSSRGSVKVYD-FSPIMRGIGYGQVLATGIVTTYYATLMALTLRYFVDSFYPTLPWSYCREEWGT 200
            |:..|.:..:. ..|:.:|:||...|.......|:..::|..|.|.:.||...|||:.|...|.|
Zfish    74 FTHEGGITCWHLLCPLAQGVGYAGQLIELYSCMYFTIILAWALFYLIFSFSSQLPWASCDNIWNT 138

  Fly   201 E-C--LDSGPQEASRATSLAGSGVRTTSAEFYFTNIILREKASIDDGIGYPSWSLALALAVAWIV 262
            : |  |.:|....:|.|.:..    |::|..::...:|.....|:: ||..:|.:||.|.|.||:
Zfish   139 DNCVNLAAGNLTFNRTTQINS----TSAATEFWERRVLSLSGGIEE-IGKINWEIALCLFVMWII 198

  Fly   263 IAGIMFKGVKSSGKASYFLALFPYVVMLVLLVRALTLPGAFDGVLYFLRPQWHKLLEPQVWYAAV 327
            ....::|||||:||..||.|.||||::||||:|.||||||..||:::|.|:...|.:||||..|.
Zfish   199 CYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPAHLADPQVWMEAG 263

  Fly   328 TQVFFSLAICFGNIIMYASYNRFGHNIYRDANIVTTLDTFTSLLSGVIIFGILGNLAYENNTTDI 392
            ||||||.::|.|.:|...|||::.:|.|||:..:..|::.||.::|..:|.:||.:|:... ..:
Zfish   264 TQVFFSYSLCSGILIALGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAVFSVLGFMAHVQG-VPV 327

  Fly   393 ASVVNGGPGLAFISYPDAIAKFKWLPQLFSVLFFLMLFVLGIGSNVGMASCMSTVIKDQFGHL-- 455
            ..|...|||||||:||.|:|...: |||::|.||:|:.:||:.|......|:.|.:.|.|..:  
Zfish   328 EEVAESGPGLAFIAYPQAVAMMPF-PQLWAVCFFIMIILLGLDSQFVAMECVVTSVTDLFPEVLR 391

  Fly   456 ---KNWTVVVGIAIVGYFLGLLYITPGGQFLLNLVDYF---GVTFVALVLAIFELVTIAWIYGVK 514
               :....|:.:.:..:|..|:.:|.||.::..|.|.:   |..|  |.|::||.:||.||:|.:
Zfish   392 RAGRRELFVLLLCLTCFFGQLIMVTEGGMYVFQLFDNYASNGACF--LFLSVFESLTIGWIFGAE 454

  Fly   515 RLCRDVEFMIGIKTSLYYRICWAVVTPLLMLTILIYTLVLYEPLKY-KDYTYQSGVYVFGWCLSA 578
            ::...::.|...:.:.::.:||..:|||:.||..:|::|.|.||.| :.|.|....:|.||.|:.
Zfish   455 KMFDIIKDMTESRPNYWFMLCWKYLTPLVSLTSFVYSMVRYTPLTYNRWYVYPDWAHVLGWLLAL 519

  Fly   579 FGVGQVLFWAIPAVRKQPSHLGLWARIRKAFEPLPNWG----PSDPQTLKRYQLFVQEGNANALF 639
            ..:..|..||          ||.....:.:.:  ..||    |.....|...|:..|......|.
Zfish   520 SSILLVPGWA----------LGQMCTGKGSLK--QRWGHLCSPDTNLMLSSIQIQEQTAEMEDLV 572

  Fly   640 RRSSI 644
            |.|:|
Zfish   573 RSSTI 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1698NP_001260835.1 SLC6sbd 75..552 CDD:271359 178/488 (36%)
si:ch211-132b12.3NP_001076419.1 SLC6sbd-TauT-like 11..550 CDD:271387 197/559 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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