DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnc4

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_006502538.1 Gene:Kcnc4 / 99738 MGIID:96670 Length:666 Species:Mus musculus


Alignment Length:338 Identity:62/338 - (18%)
Similarity:107/338 - (31%) Gaps:116/338 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 YSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLM----CLSSLGALLADGLQCTYVRLCCQ 259
            ::|..:||:|:|.:.|:|.:|.|.....||.||..:.|    .:::.|         .|..|...
Mouse   433 WAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFG---------MYYSLAMA 488

  Fly   260 LQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLNDCLEYGQK 324
            .|:..:.|:|..|  ..|...|....:.::|..|             |:..|:||          
Mouse   489 KQKLPKKRKKHVP--RPPQLESPIYCKSEETSPR-------------DSTYSDTS---------- 528

  Fly   325 GKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDV-MLMTTTSGSALLKYAPQQQQLQQQQQ 388
               ||.::||..             .:::....|..|. .:::...|:.|            .|.
Mouse   529 ---PPAREEGVV-------------ERKRADSKQNGDANAVLSDEEGAGL------------TQP 565

  Fly   389 LSTATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSAPGS 453
            |:.|..|.:...::....:.:.::                       |.|......|....|.||
Mouse   566 LALAPTPEERRALRRSGTRDRNKK-----------------------AAACFLLSAGDYACADGS 607

  Fly   454 --PAHNQAHPTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRVLASGLQDATAVNLVTASEA 516
              ....::....|..|.|  .|:||..||...::....|    .::|.|                
Mouse   608 VRKGCEKSRSLNNIAGAA--GTSLGLSPLASRYSSPYPP----RKLLLS---------------- 650

  Fly   517 STSTLEAITLPPP 529
              .....:|.|||
Mouse   651 --PPFHPLTSPPP 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 15/51 (29%)
Ion_trans_2 822..896 CDD:462301
Kcnc4XP_006502538.1 Potassium_chann 1..29 CDD:431870
BTB_KCNC2_4 35..162 CDD:349722
Ion_trans 229..487 CDD:459842 17/62 (27%)
Blue background indicates that the domain is not in the aligned region.

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