DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and Kcnk9

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_445857.2 Gene:Kcnk9 / 84429 RGDID:621451 Length:396 Species:Rattus norvegicus


Alignment Length:196 Identity:47/196 - (23%)
Similarity:80/196 - (40%) Gaps:63/196 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVL---YERNWTM 137
            |..|:.....|.::|..:|..||:..::.:...: |:.|..||      .|.|:.   |::...:
  Rat     8 TLSLIACTFTYLLVGAAVFDALESDHEMREEEKL-KAEEVRLR------GKYNISSDDYQQLELV 65

  Fly   138 LVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVT 202
            ::..:..|                     ||:                    .|.|:.:..:::|
  Rat    66 ILQSEPHR---------------------AGV--------------------QWKFAGSFYFAIT 89

  Fly   203 VITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRL-------CCQL 260
            ||||||:|...|.|.|||...:|||::|:||.|:...|||..:.     |:||.       ||.:
  Rat    90 VITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMN-----TFVRYLLKRIKKCCGM 149

  Fly   261 Q 261
            :
  Rat   150 R 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 25/69 (36%)
Ion_trans_2 822..896 CDD:462301
Kcnk9NP_445857.2 Ion_trans_2 <73..132 CDD:462301 28/99 (28%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:Q9NPC2 93..98 3/4 (75%)
Ion_trans_2 <184..243 CDD:462301
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q9NPC2 199..204
X-gate. /evidence=ECO:0000250|UniProtKB:Q9NPC2 243..248
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.