DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcns3

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_113966.2 Gene:Kcns3 / 83588 RGDID:621527 Length:491 Species:Rattus norvegicus


Alignment Length:152 Identity:32/152 - (21%)
Similarity:63/152 - (41%) Gaps:28/152 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   760 YDSTANNTETSDDEEYMQHGSEQFVLK--------KLRYHCDGKDCREAEDSEEEDEKADGRQVP 816
            |.:.|.:|:..:.|:....|....:|:        ||..|..|.....|.......|        
  Rat   267 YATLAVDTKEEESEDIENMGKVVQILRLMRIFRILKLARHSVGLRSLGATLRHSYHE-------- 323

  Fly   817 ISLVLLILASYICVGTVIFALWENWSLVDGA-------YFCFVTLSTIGYGDFVPARSFNGPELQ 874
            :.|:||.|:..|.:.:|:....|...|....       ::..::::|:||||..|. :..|..:.
  Rat   324 VGLLLLFLSVGISIFSVLIYSVEKDELASSLTSIPICWWWATISMTTVGYGDTHPV-TLAGKIIA 387

  Fly   875 LYACCAYLLLGLVLVAMSFSIL 896
              :.|  ::.|:::||:..:|:
  Rat   388 --STC--IICGILVVALPITII 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 17/80 (21%)
Kcns3NP_113966.2 BTB_POZ_KCNS3 15..122 CDD:349735
Ion_trans 184..417 CDD:459842 32/152 (21%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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