DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna6a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001124098.1 Gene:kcna6a / 795490 ZFINID:ZDB-GENE-080722-21 Length:475 Species:Danio rerio


Alignment Length:175 Identity:32/175 - (18%)
Similarity:60/175 - (34%) Gaps:57/175 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 DAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADG 248
            |..::...|..:|..::|..:||:|:|.:.|.|..||:.....|:.||    :.::....::...
Zfish   342 DDPETSFTSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSMCAIAGV----LTIALPVPVIVSN 402

  Fly   249 LQCTYVRLCCQLQRHQEHRRKS-------TPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQY 306
            ....|         |:||....       |.|.|.|..                        |..
Zfish   403 FNYFY---------HREHNEADQVEYTHVTCGRSLPMQ------------------------CDR 434

  Fly   307 DAANSETSLNDCLEYGQKGKLPPDKKEGDACQL--LRNLNPQQHF 349
            :.::|::||           :..:....|||.:  :.|..|.:.:
Zfish   435 NKSDSKSSL-----------MISEHSNDDACTISSILNFGPSEDY 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 15/62 (24%)
Ion_trans_2 822..896 CDD:462301
kcna6aNP_001124098.1 BTB_POZ 31..157 CDD:453885
Ion_trans 203..411 CDD:459842 17/81 (21%)
Blue background indicates that the domain is not in the aligned region.

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