DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnk1a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001092223.1 Gene:kcnk1a / 793480 ZFINID:ZDB-GENE-070620-26 Length:338 Species:Danio rerio


Alignment Length:209 Identity:51/209 - (24%)
Similarity:83/209 - (39%) Gaps:67/209 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQL 143
            |||..:.|.:.|.|:|..:|.|.:           |...:||..:.::   ..|.| ..|.:::|
Zfish    26 LVLAYVLYLIFGALVFSAVELPYE-----------EQLRQELRTVKQQ---FLEDN-ECLSNDRL 75

  Fly   144 RRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIG 208
            ..|....:.|:..|                 .|.|.    :|..:.:|.|:.||.::.||::|.|
Zfish    76 EEFLIKALEASNYG-----------------VSVLN----NASSNWNWDFTSALFFASTVLSTTG 119

  Fly   209 HGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQE-------- 265
            :|...|.:..||...|.|::||:|..|:.|:::                  :||..|        
Zfish   120 YGHTVPLSDGGKAFCIIYSVVGIPFTLLFLTAV------------------VQRIMEFSTRRPIE 166

  Fly   266 --HRRKSTPGTSTP 277
              |||.   |||.|
Zfish   167 FLHRRW---GTSKP 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 21/69 (30%)
Ion_trans_2 822..896 CDD:462301
kcnk1aNP_001092223.1 Ion_trans_2 <99..158 CDD:462301 21/76 (28%)
Ion_trans_2 191..267 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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