DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and Kcnk16

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001102990.1 Gene:Kcnk16 / 688996 RGDID:1582911 Length:292 Species:Rattus norvegicus


Alignment Length:214 Identity:63/214 - (29%)
Similarity:99/214 - (46%) Gaps:52/214 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PRSSLRRCC-GHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELW 121
            ||:.:..|. |.:|.||       |..|.|.:||..:|..||       ..|.|:||:.      
  Rat     2 PRAGVCSCWGGQVLPLL-------LAYICYLLLGATIFQRLE-------KQAEAQSRDQ------ 46

  Fly   122 IITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAG 186
            ...|||..|  .|:|.|..:.|.:|...|:.|..:           |:..:|:::          
  Rat    47 FQLEKLRFL--ENYTCLDQQALEQFVQVILEAWVK-----------GVNPKGNST---------- 88

  Fly   187 DSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQC 251
            :..:|.|..:..::.||:||||:|:|.|.|.||::..:||||:|:||.::.|:.||.    ||:.
  Rat    89 NPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALMGIPLNVVFLNHLGT----GLRA 149

  Fly   252 TYVRLCCQLQRHQEHRRKS 270
            ...    .|.|.::|.|.|
  Rat   150 HLT----TLDRWEDHPRHS 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 24/69 (35%)
Ion_trans_2 822..896 CDD:462301
Kcnk16NP_001102990.1 Ion_trans_2 87..145 CDD:462301 23/67 (34%)
Ion_trans_2 180..248 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.