DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnk13

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_071629.2 Gene:Kcnk13 / 64120 RGDID:68941 Length:405 Species:Rattus norvegicus


Alignment Length:241 Identity:70/241 - (29%)
Similarity:92/241 - (38%) Gaps:71/241 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RRC-C--GHLLK-----LLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRE 119
            |.| |  |||.:     ||.:  ||:||   |.:.|..:|..||..|::.     ||.|      
  Rat     4 RGCSCSPGHLNEDNARFLLLA--GLILL---YLLGGAAVFSALELAQELQ-----AKQR------ 52

  Fly   120 LWIITEKL-NVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGY 183
             |  .|:| |.....|   |..|:||.|......||:.|....|                     
  Rat    53 -W--EERLANFSRGHN---LSREELRGFLRHYEEATKAGIRMDS--------------------- 90

  Fly   184 DAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG----VPLMLMCLSSLGAL 244
               ....|.|:.|..:..||:||||.|..||.|..||:..|||.|:|    :....:.|..|..:
  Rat    91 ---VRPRWDFTGAFYFVGTVVTTIGFGMTTPATTGGKVFLIFYGLIGCASTILFFNLFLERLITV 152

  Fly   245 LADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDT 290
            :|      ||...|   .||:.||:   ||.......|....|.|:
  Rat   153 IA------YVMRTC---HHQQLRRR---GTVARDNGKAPRKGEADS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 22/73 (30%)
Ion_trans_2 822..896 CDD:462301
Kcnk13NP_071629.2 Ion_trans_2 84..150 CDD:462301 23/89 (26%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 110..115 3/4 (75%)
Ion_trans_2 203..285 CDD:462301
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:P57789 237..242
Blue background indicates that the domain is not in the aligned region.

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