DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and kcnk13a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001103587.1 Gene:kcnk13a / 571467 ZFINID:ZDB-GENE-080219-46 Length:409 Species:Danio rerio


Alignment Length:139 Identity:37/139 - (26%)
Similarity:66/139 - (47%) Gaps:24/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   795 KDCREAE---------DSEEE-----DEKADGRQVPISLVLLIL--ASYI--CVGTVIFALWENW 841
            |.|.|.:         ||.::     ::...|.:..:..|:|||  |:.|  |..:.:::..|.|
Zfish   159 KSCHEIQRRRKGVLPHDSRQDSRLNHEDSLAGWKPSVYCVMLILCVAAIIISCCASAMYSSIEGW 223

  Fly   842 SLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQLYACCAYL--LLGLVLVAMSFS----ILETQL 900
            ..:|..|||||..||||:||.|.::........:|..|.:|  |:|:..:...|:    :::..|
Zfish   224 RYLDSLYFCFVAFSTIGFGDMVSSQRAIYENQTVYRICNFLFILMGVCCIYSLFNVISIVIKQVL 288

  Fly   901 MWKCKRIAV 909
            .|..|::.:
Zfish   289 NWLLKKLKI 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 27/83 (33%)
kcnk13aNP_001103587.1 Ion_trans_2 <94..151 CDD:462301
Ion_trans_2 204..286 CDD:462301 24/81 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.