DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna1b

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_699869.2 Gene:kcna1b / 571208 ZFINID:ZDB-GENE-140515-1 Length:493 Species:Danio rerio


Alignment Length:160 Identity:33/160 - (20%)
Similarity:54/160 - (33%) Gaps:47/160 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 DSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQC 251
            ||...|..:|..::|..:||:|:|.:.|.|..||:.....|:.||    :.::....::......
Zfish   351 DSFFTSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGV----LTIALPVPVIVSNFNY 411

  Fly   252 TYVRLCCQLQRHQEHRRKSTPG--------TSTPSASSAANSREK-------------------- 288
            .|         |:|     |.|        .|.|:.:|..||..:                    
Zfish   412 FY---------HRE-----TEGDEQAQLLTVSNPNIASDTNSSRRSSSVVSKSEYMEIDEDLNNS 462

  Fly   289 -DTDKRSKRRMANCKGCQYDAANSETSLND 317
             |..:.:..|..||.....:..|....|.|
Zfish   463 IDNFREANLRTGNCTVANQNCVNKGKRLTD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 16/59 (27%)
Ion_trans_2 822..896 CDD:462301
kcna1bXP_699869.2 BTB_POZ 32..158 CDD:453885
Ion_trans 161..416 CDD:459842 18/77 (23%)
Blue background indicates that the domain is not in the aligned region.

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