DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnd2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001076336.1 Gene:kcnd2 / 570188 ZFINID:ZDB-GENE-041210-70 Length:630 Species:Danio rerio


Alignment Length:560 Identity:109/560 - (19%)
Similarity:172/560 - (30%) Gaps:196/560 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLRRC----CGHLLKLLF---STPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLR 118
            ||.|.    ||....|.|   .|..:::..:.|      |..|:.||           ||...::
Zfish   211 SLNRAKELSCGERYALAFFCLDTACVMIFTVEY------LLRLIAAP-----------SRYKFVK 258

  Fly   119 ELWIITEKLNVL-YERNWTMLVHEQ-------LRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSA 175
            .:..|.:.:.:: |.....|..:|.       ||.|.   |....:.|..|:|....|...:..|
Zfish   259 SVMSIIDVVAIMPYYIGLVMTDNEDVSGAFVTLRVFR---VFRIFKFSRHSAGLRILGYTLKSCA 320

  Fly   176 SALGH----------------FGYDAGDSQS--WSFSEALLYSVTVITTIGHGSLTPRTAAGKLA 222
            |.||.                |..:.|.|.|  .|...|..|::..:||:|:|.:.|:|..||:.
Zfish   321 SELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPAAFWYTIVTMTTLGYGDMVPKTIMGKIF 385

  Fly   223 TIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSRE 287
            ....:|.||.::        ||....:...:.|:..|.||.::.|                    
Zfish   386 GSICSLSGVLVI--------ALPVPVIVSNFSRIYHQSQRAEKRR-------------------- 422

  Fly   288 KDTDKRSKRRMANCKGCQYDAANSETSLNDCLEYGQKGKLPPDKKEGDACQLLRNLNPQQHFYQQ 352
                .:.|.|:|..:..:...||:      .|:|.:.|.|...::|.                  
Zfish   423 ----AQKKTRLARIRAAKSGGANA------YLQYKRNGMLVDMEEEA------------------ 459

  Fly   353 QQQQPQQPDVMLMTTTSGSALLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQLQQNFV-- 415
                         :..:|.||:..|             ..|...|||.: |...::.....||  
Zfish   460 -------------SKEAGQALVCKA-------------NPTFETQHHHL-LHCLEKTTNHEFVDE 497

  Fly   416 -AVPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSAPGSP--------AHNQAHPTQNPNGNALG 471
             ...:|.:.:.|..|             ....:.|...||        ..|:......||.|..|
Zfish   498 QTYETSCMEVSLAKP-------------SMSRSSSMSSSPHGLSSCCTRRNKRKSFNVPNSNMAG 549

  Fly   472 NTTLGSQPLVKYHTIHL--QPASGKHRVLASGLQDATAVNLVTASEASTSTLEAITLPPPPAYQT 534
            ......|.|   .||.:  :|.|.....|.:..::...:|   :.|.|..|...|::|.||....
Zfish   550 GRRGSIQEL---STIQIRERPLSNSRSSLNAKFEETVPLN---SEEPSYITAAVISMPTPPVTTP 608

  Fly   535 ASVHAVRRAKFVAKPLPQEINALMDCGTGSPDLSGRHDLL 574
            ..|                            ||:..||.|
Zfish   609 EGV----------------------------DLASSHDFL 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 22/87 (25%)
Ion_trans_2 822..896 CDD:462301
kcnd2NP_001076336.1 BTB_POZ 6..143 CDD:453885
Ion_trans 183..416 CDD:459842 53/232 (23%)
DUF3399 471..547 CDD:463381 17/102 (17%)
Blue background indicates that the domain is not in the aligned region.

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