DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnc1a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_005168950.1 Gene:kcnc1a / 565419 ZFINID:ZDB-GENE-061220-10 Length:609 Species:Danio rerio


Alignment Length:97 Identity:24/97 - (24%)
Similarity:48/97 - (49%) Gaps:29/97 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   822 LILASYICVGTVIFAL----------------------WENWSLVDGAYFCFVTLSTIGYGDFVP 864
            |:|..::.:|.:|||.                      ::|..:  |.::..||::|:||||..|
Zfish   344 LLLIIFLALGVLIFATMIYYAERIGANPNDPRASEHTHFKNIPI--GFWWAVVTMTTLGYGDMYP 406

  Fly   865 ARSFNGPELQLYACCAYLLLGLVLVAMSFSIL 896
             ::::|  :.:.|.||  |.|::.:||...::
Zfish   407 -QTWSG--MLVGALCA--LAGVLTIAMPVPVI 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 24/95 (25%)
kcnc1aXP_005168950.1 BTB_KCNC1_3 6..122 CDD:349721
Ion_trans 189..445 CDD:459842 24/97 (25%)
Blue background indicates that the domain is not in the aligned region.

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